How to deal with EnsDb.Hsapiens.v86?

[autumnfe]

When I ran SCEVAN, I encountered error.

So, I looked into the code of annotateGens function().

In the begining of code, I cound see the followin code:

if(organism == "human"){
edb <- EnsDB_Hsapiens_v86 #From EnsDb.Hsapiens.v86
}else{
edb <- EnsDb_Mmusculus_v79 #From EnsDb.Hsapiens.v86
}

Even if I load EnsDb.Hsapiens.v86 library, I couldn't see 'EnsDB_Hsapiens_v86' object. How to deal with this issue?

Also, when I see the code of preprocessMtx function(), I could see the following code:

if(organism == "human"){
totChr <- 22
cellcycle <- reactome_cellcycle #From EnsDb.Hsapiens.v86
}else{
totChr <- 19
cellcycle <- reactome_cellcycle_Mmusculus #From EnsDb.Hsapiens.v86
}

But, I couldn't find 'reactome_cellcycle' object at all.
How to resolve this issue?

[AntonioDeFalco]

They are objects stored within the R package, which you can find in the sysdata.rda of the R folder.