Euro-BioImaging/BatchConvert
A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.
PythonMIT
Stargazers
- adamjtaylor@Sage-Bionetworks
- berombauUniversiteit Gent
- BioinfoTongLIWellcome Sanger Institute
- camlloydCoSyne Therapeutics
- DenizSalt
- GenevieveBuckleyMonash University
- glyg@France-Bio-Imaging-Data
- joshmoore@openmicroscopy @German-BioImaging
- LuthienTinuvielShouko
- m-albertInstitut Pasteur
- martinschatz-czUCT Prague, VMCF - Science Faculty of Charles University, Natinal Technical Library in Prague
- MicheleBortolSingle-cell Open Lab, German Cancer Research Center (DKFZ), Heidelberg, Germany
- onemariaFrankfurt
- pr4deeprWalter and Eliza Hall Institute of Medical Research
- rahedgesVizgen
- sebgotiEMBL
- StRigaudInstitut Pasteur, Paris
- tcompa