Flu09

Pinned Repositories

• pySCENIC

  pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

  Language:Python42418531179

• rigraph

  igraph R package

  Language:R54334888201

• sra-tools

  SRA Tools

  Language:C1.1k56852242

• vscode-R

  R Extension for Visual Studio Code

  Language:TypeScript1.1k231k128

• rocker

  R configurations for Docker

  Language:Shell1.5k63426273

• rsync

  An open source utility that provides fast incremental file transfer. It also has useful features for backup and restore operations among many other use cases.

  Language:C2.7k54423328

• seurat

  R toolkit for single cell genomics

  Language:R2.3k737.9k905

• anndata

  Annotated data.

  Language:Python56914724152

• scvelo

  RNA Velocity generalized through dynamical modeling

  Language:Python41113786102

• clusterProfiler

  :bar_chart: A universal enrichment tool for interpreting omics data

  Language:R1k45637253

Flu09's Repositories