Grelot

Grelot's Stars

• microsoft/Web-Dev-For-Beginners

  24 Lessons, 12 Weeks, Get Started as a Web Developer

  Language:JavaScript83.9k2.7k29312.4k

• microsoft/ML-For-Beginners

  12 weeks, 26 lessons, 52 quizzes, classic Machine Learning for all

  Language:HTML70.6k1k13614.8k

• microsoft/Data-Science-For-Beginners

  10 Weeks, 20 Lessons, Data Science for All!

  Language:Jupyter Notebook28.6k5161175.9k

• django-crispy-forms/django-crispy-forms

  The best way to have DRY Django forms. The app provides a tag and filter that lets you quickly render forms in a div format while providing an enormous amount of capability to configure and control the rendered HTML.

  Language:Python5k114691732

• lh3/seqtk

  Toolkit for processing sequences in FASTA/Q formats

  Language:C1.4k62176307

• nf-core/rnaseq

  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  Language:Nextflow954158674716

• GuangchuangYu/hexSticker

  :sparkles: Hexagon sticker in R

  Language:R7691752171

• tidyverse/multidplyr

  A dplyr backend that partitions a data frame over multiple processes

  Language:R6424011674

• YinLiLin/CMplot

  📊 Circular and Rectangular Manhattan Plot

  Language:R54115131114

• NBISweden/AGAT

  Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/

  Language:Perl4764534458

• deweylab/RSEM

  RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

  Language:C++42422198118

• gpertea/gffread

  GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more

  Language:C++386913539

• cgroza/GraffiTE

  GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

  Language:R1354437

• Kappa-Dev/KappaTools

  Tool suite for kappa models. Documentation and binaries can be found in the release section. Try it online at

  Language:OCaml1141863641

• snakemake-workflows/dna-seq-varlociraptor

  A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.

  Language:Python8391540

• brinkmanlab/GenomeD3Plot

  SVG based genome viewer written in javascript using D3

  Language:JavaScript6713017

• tpook92/HaploBlocker

  R-package: Calculation of haplotype blocks and libraries

  Language:R302132

• holtzy/GenMap-Comparator

  An application to compare genetic maps with D3 & Shiny

  Language:R22739

• institut-de-genomique/Gmove

  Gmove is a gene prediction tool

  Language:C++211

• ANHIG/IPDMHC

  Github for files currently published in the IPD-MHC FTP Directory hosted at the European Bioinformatics Institute

  14603

• shengyongniu/rSeqTU

  A machine learning based R package for identification of bacterial transcriptional units

  Language:R9242

• BiomathematicsAndStatisticsScotland/TetraploidSNPMap

  Language:Java6102

• brianjohnhaas/trinityrnaseq

  Trinity RNA-Seq de novo transcriptome assembly

  Language:Perl5300

• guertinlab/fqdedup

  Remove PCR duplicates from FASTQ files

  Language:Rust3211

• cbirbes/NextFlowPipeline

  Nextflow genome assembly polishing pipeline

  Language:Nextflow2101

• PBR/PediHaplotyper

  PediHaplotyper: software for consistent assignment of marker haplotypes in pedigrees

  Language:R2401

• jazflo/Conda-environments-and-OBITools

  Creating a new environment with python 2.7 to work with OBITools

  1100

• jazflo/Miniconda-Bioconda

  Working with Miniconda and Bioconda to install bioinformatic tools

  1100

• jazflo/STACKS

  Steps to analyze RADseq data (with modifications for BestRAD libraries)

  Language:Shell1100

• jlboat/beagle

  Beagle is a software package for phasing genotypes and for imputing ungenotyped markers.

  Language:Java1200