Jhsmit

ColiCoords

Single-cell fluorescence microscopy data analysis

ColiCoords-Paper

Code for ColiCoords paper

dont-fret

Don't FRET: A python webserver for confocal smFRET burst search

HDX-MS-datasets

Repository for HDX-MS datasets

hdxms-datasets

Download and parse curated HDX-MS datasets

HDXrate

Calculate protein amide hydrogen exchange rate

ipymolstar

PDBeMolstar as anywidget

ipymolstar-demo

jupyterlite demo of ipymolstar

PyHDX

Derive ΔG for single residues from HDX-MS data

PymageJ

Python tools for ImageJ

Jhsmit/ColiCoords

Single-cell fluorescence microscopy data analysis

Jhsmit/PymageJ

Python tools for ImageJ

Jhsmit/ColiCoords-Paper

Code for ColiCoords paper

Jhsmit/param_docs

Example of param sphinx docstrings

Jhsmit/academic-kickstart

Jhsmit/atom

Memory efficient Python objects

Jhsmit/awesome-panel

A repository for sharing knowledge on Panel by HoloViz in order to build awesome analytics apps in Python

Jhsmit/awesome-panel-extensions

The purpose of this repository is to make it as easy as possible to develop and use awesome Panel extensions.

Jhsmit/calc_hdx

Computational predictions of HDX-MS data from simulation & modeling

Jhsmit/exPfact

Jhsmit/gimli

Geophysical Inversion and Modeling Library :earth_africa:

Jhsmit/hdxrate-feedstock

A conda-smithy repository for hdxrate.

Jhsmit/micromanager-samples

Python samples for Micro-Manager: image acquisition and microscope control system

Jhsmit/NicoLase

Open-source diode laser combiner, fiber launch, and sequencing controller for fluorescence microscopy

Jhsmit/OpenMicroscopy

Non-comprehensive list of projects and resources related to open microscopy.

Jhsmit/pymagej-feedstock

A conda-smithy repository for pymagej.

Jhsmit/SmitSuite

Various tricks and tools to make life easier

Jhsmit/symfit

Symbolic Fitting; fitting as it should be.

Jhsmit/T3SS-paper

Code for processing of live-cell microscopy data in Yuan 2021 paper