LoLab-MSM/pyvipr

Issues

• Failed to load model class 'CytoscapeModel' from module 'pyvipr' on a fresh install

  #226 opened 2 years ago by kaisengit
  4

• Deprecation warning when adding pyvipr to version 4 of JupyterLab

  #231 opened a year ago by blakeaw
  0

• How to run visualize sbml model?

  #188 opened 3 years ago by hsauro
  2

• can't get it to work from Google Colab

  #187 opened 3 years ago by hsauro
  3

• Documentation: projected_species_rules_view(model)

  #84 opened 4 years ago by glucksfall
  1

• Errors when calling atom_rules_view

  #75 opened 4 years ago by blakeaw
  1

• Error when calling Compartment View

  #74 opened 4 years ago by blakeaw
  1

• Error displaying widget: model not found

  #60 opened 4 years ago by dweindl
  2

• An in-range update of cytoscape is breaking the build 🚨

  #36 opened 5 years ago by greenkeeper
  2

• An in-range update of rimraf is breaking the build 🚨

  #34 opened 5 years ago by greenkeeper
  0

• Create Tippy instances on demand

  #31 opened 5 years ago by ortega2247
  1

• An in-range update of style-loader is breaking the build 🚨

  #28 opened 5 years ago by greenkeeper
  0

• An in-range update of webpack is breaking the build 🚨

  #29 opened 5 years ago by greenkeeper
  0

• An in-range update of cytoscape-popper is breaking the build 🚨

  #30 opened 5 years ago by greenkeeper
  0

• Apply layout to compound nodes

  #9 opened 5 years ago by ortega2247
  0

• User-defined color scales

  #7 opened 5 years ago by ortega2247
  0

• Integrate with tellurium simulations

  #14 opened 5 years ago by ortega2247
  1

• Use sensitivity analysis or parameter scanning to identify and visualize the species that might be important for the model

  #15 opened 5 years ago by ortega2247
  0

• Only show a particular set of reactions or nodes during a dynamic simulation

  #13 opened 5 years ago by ortega2247
  0

• dynamic visualization breaks when process is changed

  #10 opened 5 years ago by ortega2247
  1

• Node-centric dynamics

  #8 opened 5 years ago by ortega2247
  0

• User-defined normalizations

  #6 opened 5 years ago by ortega2247
  0

• Initial Update

  #4 opened 6 years ago by pyup-bot
  0

• Use _modules and _function of pysb objects to create new networks

  #2 opened 6 years ago by ortega2247
  0

• Use pysb model compartments to create new networks

  #3 opened 6 years ago by ortega2247
  0

• Widget is not plotting square nodes of reactions and rules

  #1 opened 6 years ago by ortega2247
  0