MaayanLab/Playbook-Workflow-Builder

Issues

• "Enrich Term Search Result"

  #258 opened 3 months ago by GDTV65
  1

• Trying to go back to "graph" mode does not display the workflow in that mode

  #256 opened 3 months ago by AviMaayan
  1

• Add the ChatGPT feature to the main UI

  #255 opened 3 months ago by AviMaayan
  0

• Incomplete BioCompute User Guide

  #247 opened 5 months ago by u8sand
  0

• CTD cards do not work with example gene set

  #244 opened 5 months ago by AviMaayan
  1

• Complete stories and better descriptions for most metanodes

  #230 opened 5 months ago by u8sand
  1

• Gene Identifier Standardization

  #243 opened 5 months ago by u8sand
  0

• Suggestion: Text list comparison

  #241 opened 6 months ago by reductiveminded
  0

• STRING and Wikipathways Nodes

  #237 opened 6 months ago by reductiveminded
  4

• Make all the arrows in Fig. S1 the same thickness (red boxes)

  #197 opened 8 months ago by AviMaayan
  0

• Request: Delete Option for individual workflow nodes

  #225 opened 7 months ago by reductiveminded
  2

• Addition of Differential Expression package (DESeq2)

  #227 opened 7 months ago by reductiveminded
  1

• Differential Expression

  #232 opened 6 months ago by reductiveminded
  1

• Suggestion: Filter genes based on glycotransferase and or hydrolase activity

  #236 opened 6 months ago by reductiveminded
  0

• Error in GlyGen response

  #218 opened 7 months ago by AviMaayan
  0

• All CTD cards for the example gene set do not produce any results

  #234 opened 6 months ago by AviMaayan
  1

• Error with ":Query KF Gene Expression in Tumor"

  #238 opened 6 months ago by reductiveminded
  0

• After selecting the control and perturbation samples with the example anndata, nothing happens

  #235 opened 6 months ago by AviMaayan
  0

• Adding a Metadata Matrix

  #233 opened 6 months ago by reductiveminded
  1

• Improve descriptions of metanodes

  #206 opened 7 months ago by AviMaayan
  1

• Add share button that would just copy the URL to the clipboard

  #187 opened 7 months ago by AviMaayan
  2

• After closing the chat windows it disappears and you can't bring it back (or it is not obvious how)

  #211 opened 7 months ago by AviMaayan
  1

• Trying to go back to "graph" mode does not display the workflow in that mode

  #190 opened 7 months ago by AviMaayan
  1

• Issue: Website crashes upon addition of a counts matrix

  #226 opened 7 months ago by reductiveminded
  2

• Manual sample labels should work from a Gene Count Matrix

  #228 opened 7 months ago by u8sand
  0

• If you are at the "end" of a workflow "nothing happens"

  #222 opened 7 months ago by AviMaayan
  0

• When clicking on the "text to workflow" link a yellow bar is flashing when you are already signed in

  #220 opened 7 months ago by AviMaayan
  0

• You can't see the minimize buttons in dark mode

  #219 opened 7 months ago by AviMaayan
  0

• The maximize button is confusing... I clicked on it to bring back the small chat window.

  #221 opened 7 months ago by AviMaayan
  0

• Clicking the expand section on reports jumps the view all the way up... See below:

  #215 opened 7 months ago by AviMaayan
  0

• Not clear what the two hamburgers in the chat box suppose to do (add tooltips)

  #212 opened 7 months ago by AviMaayan
  1

• The second hamburger (the one that put the chat in the report is hard to follow what happened)

  #214 opened 7 months ago by AviMaayan
  0

• The minimize hamburger should look like a minimize icon (-)

  #213 opened 7 months ago by AviMaayan
  4

• "Bar chart" and "bar plot" should be "horizontal bar plot" and "vertical bar plot"

  #216 opened 7 months ago by AviMaayan
  0

• Too much text in the initial chat text box

  #217 opened 7 months ago by AviMaayan
  0

• Logging information is ending up in downloaded files

  #186 opened 8 months ago by u8sand
  4

• White space after you press the start chat button

  #203 opened 8 months ago by AviMaayan
  4

• IDG logo too big

  #201 opened 8 months ago by AviMaayan
  0

• Does not look like there are any "Viewer" metanodes listed here

  #204 opened 8 months ago by AviMaayan
  2

• Why a start button is needed for the chatbot?

  #202 opened 8 months ago by AviMaayan
  0

• Link the main site to this table

  #205 opened 8 months ago by AviMaayan
  0

• Missing OpenAI key causes exception

  #199 opened 8 months ago by pmcneely
  1

• Add the ChatGPT feature to the main UI

  #191 opened 8 months ago by AviMaayan
  0

• Add margins to playbook logo in corner

  #195 opened 8 months ago by AviMaayan
  0

• Update favicon with new logo

  #196 opened 8 months ago by AviMaayan
  3

• Update site with new logo

  #193 opened 8 months ago by AviMaayan
  0

• Update link and logo in the footer with the CFDE Workbench logo and the cfde.info link

  #194 opened 8 months ago by AviMaayan
  1

• Change the defaults in the drug-drug interaction playbook to "bleeding" "warfarin" and "aspirin" to match the paper

  #192 opened 8 months ago by AviMaayan
  0

• Move repo to the Ma'ayan Lab organization

  #188 opened 8 months ago by AviMaayan
  0

• Add ability to save supervenn as SVG/PNG/JPEG

  #189 opened 8 months ago by AviMaayan
  0