Pinned Repositories
AWS-iGenomes-build
Building script for AWS-iGenomes
CAW-References
References files for CAW
compile-latex
Simple beamer/latex compiler using Nextflow, provided with Docker container
conferenceCoverage
Twitter Conference Coverage analysis from hastag using R-project
maxulysse.github.io
My own jekyll personnal website >>>
my_memes
my own memes
myCV
my CV made with compile-latex
nf-core_sarek
Main repo:
nf-references
Presentations
My presentations made with compile-latex
maxulysse's Repositories
maxulysse/nf-core_sarek
Main repo:
maxulysse/nf-references
maxulysse/jebifreprohackathon
maxulysse/maxulysse
My own GitHub Profile README
maxulysse/nf-core_configs
Main repo:
maxulysse/nf-core_modules
Main repo:
maxulysse/nf-core_rnavar
Main repo:
maxulysse/nextflow
A DSL for data-driven computational pipelines
maxulysse/nextflow-website
Nextflow public web site
maxulysse/nf-core_bamtofastq
Converts bam or cram files to fastq format and does quality control.
maxulysse/nf-core_createpanelrefs
Generate Panel of Normals, models or other similar references from lots of samples
maxulysse/nf-core_demultiplex
Demultiplexing pipeline for sequencing data
maxulysse/nf-core_fetchngs
Pipeline to fetch metadata and raw FastQ files from public and private databases
maxulysse/nf-core_imcyto
main repo: https://github.com/nf-core/imcyto
maxulysse/nf-core_mag
main repo: https://github.com/nf-core/mag
maxulysse/nf-core_methylseq
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
maxulysse/nf-core_references
maxulysse/nf-core_riboseq
Pipeline for the analysis of ribosome profiling, or Ribo-Seq (also named ribosome footprinting) data.
maxulysse/nf-core_rnadnavar
main repo: https://github.com/nf-core/rnadnavar
maxulysse/nf-core_rnafusion
Main repo:
maxulysse/nf-core_rnaseq
Main repo:
maxulysse/nf-core_scrnaseq
A single-cell RNAseq pipeline for 10X genomics data
maxulysse/nf-core_tools
Main repo:
maxulysse/nf-core_variantannotation
maxulysse/nf-core_viralrecon
Main repo:
maxulysse/nf-core_website
Main repo:
maxulysse/nf-training-intro
maxulysse/object_object_error
maxulysse/seqera-kit
Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
maxulysse/seqeralabs_nf-aggregate
main repo: https://github.com/seqeralabs/nf-aggregate