RNAcentral/R2DT
Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
PostScriptApache-2.0
Pinned issues
Issues
- 0
outdated link to CRW2: Comparative RNA Web-2
#138 opened by ValWood - 6
- 6
Switch to relative coordinates
#131 opened by AntonPetrov - 0
Use Typer and Rich
#133 opened by AntonPetrov - 0
Improve thumbnail images
#130 opened by AntonPetrov - 0
Add --verbose option to control reporting
#114 opened by AntonPetrov - 0
Update Traveler to latest version
#128 opened by AntonPetrov - 0
- 2
Bundle Rfam seeds into cms tarball?
#124 opened by afg1 - 1
Possible off-by-one error?
#121 opened by pzhaojohnson - 0
Use --detail option with tRNAscan-SE
#97 opened by patriciaplchan - 0
Switch to Python API where possible
#113 opened by AntonPetrov - 0
- 0
Checklist for release 1.4
#86 opened by AntonPetrov - 0
Make it easier to update Traveler
#56 opened by AntonPetrov - 1
Colour diagrams based on residue-level data
#55 opened by AntonPetrov - 0
Update tRNA models
#83 opened by AntonPetrov - 1
Update Type T RNase P RNA templates
#84 opened by AntonPetrov - 0
Integrate with RNAFramework
#108 opened by AntonPetrov - 1
Use JSON Schema for creating new templates
#77 opened by AntonPetrov - 2
Secondary feature annotations (helix, ES, etc)
#107 opened by joegeorgeson - 10
- 1
Host docs on RTD
#88 opened by AntonPetrov - 4
- 0
Include name in json schema output
#100 opened by AntonPetrov - 1
Models missing in R2DT v1.3 cms
#99 opened by afg1 - 0
- 3
Temp file collision causing cluster jobs to hang
#96 opened by afg1 - 5
View structures with pseudoknots
#91 opened by VonBoss - 0
- 0
Use more precise SO terms for mt rRNAs
#87 opened by blakesweeney - 0
Checklist for release 1.3
#82 opened by AntonPetrov - 9
- 0
Prevent duplicate labels in templates
#63 opened by blakesweeney - 0
Add a flag to override ribovore filters
#75 opened by AntonPetrov - 0
Add Solanum lycopersicum templates
#65 opened by AntonPetrov - 0
- 0
Make a curated template for HCV IRES
#62 opened by AntonPetrov - 3
r2dt/traveller segfault for some sequences/models
#81 opened by afg1 - 2
5.8S sequences folded differently
#61 opened by nawrockie - 2
- 0
- 0
- 1
Integrate with JAR3D
#72 opened by AntonPetrov - 3
- 0
- 1
Zoom centering
#69 opened by trprcll - 2
- 0
R2DT fails with complex header lines
#64 opened by blakesweeney - 4
Integrate with RiboDraw
#59 opened by AntonPetrov