Sage-Bionetworks/synapsePythonClient

Issues

• Large Dataset Download Frozen/Stuck with held Lock (Download Never Finishes) with `synapseutils.syncFromSynapse`

  #1110 opened 4 months ago by tommypkeane-gehc
  6

• Progress stops during the download

  #1088 opened 4 months ago by Breeze-Zero
  4

• synapseclient.core.exceptions.SynapseHTTPError: 403 Client Error: insufficient_scope. Request lacks scope(s) required by this service: modify

  #1075 opened 8 months ago by FengheTan9
  1

• `FutureWarning` received when reading in a Synapse table as a data frame

  #1073 opened 9 months ago by vpchung
  1

• Endpoint URL not utilized for external S3 resources

  #902 opened 3 years ago by kellrott
  3

• [Bug] unexpected keyword argument 'line_terminator'

  #977 opened a year ago by vpchung
  2

• ImportError: urllib3 v2.0 only supports OpenSSL 1.1.1+

  #957 opened a year ago by NarayanSchuetz
  5

• Slow uploads of data with single records

  #868 opened 2 years ago by esurface
  2

• 2.4.0 release doesn't generate easy_path file

  #872 opened 2 years ago by najoshi
  7

• Caching is not working for function `_queryTableCsv` function

  #952 opened 2 years ago by linglp
  2

• Let the user specify the number of allowed threads

  #874 opened 2 years ago by moskalenko
  1

• Upgrade to Pandas 2.0

  #953 opened 2 years ago by andrewelamb
  0

• [Feature request] Add `is_synapse_id` to the client

  #948 opened 2 years ago by vpchung
  0

• utils' `is_synapse_id` does not work as intended

  #947 opened 2 years ago by vpchung
  3

• build_table error

  #943 opened 2 years ago by andrewelamb
  1

• as_table_columns function is mishandling mixed data types

  #940 opened 2 years ago by linglp
  1

• login error

  #897 opened 2 years ago by ptnaimelmm
  2

• Add unit test for synapseclient.core.utils#printTransferProgress

  #748 opened 2 years ago by jkiang13
  1

• Connecting to Synapse documentation

  #778 opened 2 years ago by kelshmo
  1

• Update Entity class to be compatible with the new Dataset entity

  #913 opened 2 years ago by vpchung
  0

• Feature Request: Filter capability for syncFromSynapse

  #899 opened 3 years ago by georggrab
  1

• Synapse Python Client -> Sign Up error -> Timestamp in request is out of date

  #893 opened 3 years ago by javierpastorfernandez
  2

• Passing a pandas dataframe with a column called "read" breaks the type parsing in as_table_columns()

  #875 opened 3 years ago by esurface
  2

• FileEntity 'path' property has wrong separator in Windows.

  #678 opened 3 years ago by pcstout
  4

• deepcopy() of a synapseclient.Synapse object broken after upgrade to 2.2.2

  #794 opened 3 years ago by atpage
  2

• Synapse login not the same with `authToken` and `apiKey`

  #869 opened 3 years ago by sujaypatil96
  11

• Data are uploaded in duplicate if rows are added and the schema changes simulatneously

  #867 opened 3 years ago by esurface
  6

• Timeout issue

  #799 opened 4 years ago by sheenaseven
  1

• Downloading files/folders from synapse with additional jamboree credentials fails

  #783 opened 4 years ago by s-hoyt
  4

• Allow overriding the cache location via Synapse() constructor

  #767 opened 4 years ago by keller-mark
  2

• download speed, unnecessary REST calls

  #686 opened 4 years ago by wr0112358
  2

• support custom Session objects (feature requests)

  #714 opened 4 years ago by zdk123
  3

• Re-uploads a file when there are no changes

  #674 opened 4 years ago by pcstout
  3

• Have an exclusion/inclusion list for syncFromSynapse (feature request)

  #525 opened 4 years ago by npklein
  5

• Add unit test for synapseclient.core.utils#humanizeBytes

  #747 opened 4 years ago by jkiang13
  0

• Command line download of tables

  #566 opened 6 years ago by kellrott
  3

• support python 3.8

  #719 opened 5 years ago by joshua-gould
  3

• import error

  #689 opened 5 years ago by fizwit
  2

• UnicodeDecodeError on special characters when storing file

  #680 opened 5 years ago by pcstout
  11

• Make CACHE_ROOT_DIR customizable

  #627 opened 6 years ago by pcstout
  2

• SynapseFileCacheError on Ubuntu Server edition

  #668 opened 6 years ago by attilagk
  5

• os.errno removed in Python3.7

  #602 opened 6 years ago by kellrott
  1

• Error when getting EntityViewSchema that does not exist

  #586 opened 6 years ago by pcstout
  1

• from backports import csv

  #504 opened 7 years ago by fizwit
  4

• synapseutils.syncFromSynapse fails on empty folder

  #576 opened 6 years ago by pcstout
  1

• KeyError when trying to download using Synapse Client 1.8.1

  #547 opened 6 years ago by npklein
  6

• When downloading using Python 2.7 backport csv writer gives an UnicodeEncodeError

  #530 opened 7 years ago by npklein
  4

• 1.7.4 fails to install

  #507 opened 7 years ago by mmerickel
  1

• synapseutils.sync.syncFromSynapse throws error when syncing a Table object

  #469 opened 7 years ago by scottkd
  1

• downloadTableFile behaviour change in 1.7.1

  #428 opened 7 years ago by telferm57
  3