Pinned Repositories
361Division
361 Division - Scientific Training, Education and Learning
Aequatus
Earlham Institute's Synteny Browser
earlham-galaxytools
Galaxy tools and workflows developed at the Earlham Institute
KAT
The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.
kontaminant
Tool to look for contaminants, with a kmer database.
lncRNA-analysis
NanoOK
Analysis tool for Nanopore sequencing data
RAMPART
A configurable de novo assembly pipeline
statsdb
StatsDB
TGACBrowser
TGAC's Genome Browser
Earlham Institute's Repositories
TGAC/RAMPART
A configurable de novo assembly pipeline
TGAC/kontaminant
Tool to look for contaminants, with a kmer database.
TGAC/statsdb
StatsDB
TGAC/2016-03-08-TGAC
TGAC/bii-webapp
BII web/COPO
TGAC/BIP_training
TGAC/conan
Conan2 lightweight workflow manager
TGAC/Mozfest2015
Python/Django skeleton project for user driven ontology creation session at Mozfest2015
TGAC/2016-06-07-TGAC
TGAC/2016-10-18-EI
TGAC/2017-04-26-norwich
TGAC/active-nav-q
TGAC/course_EMBO_at_TGAC_PPI_Sep2015
Program and some material for EMBO Practical Course on computational analysis of protein-protein interactions: From sequences to networks, taking place at TGAC, Norwich, UK, Sep-Oct 2015
TGAC/fluxion-tools
Fluxion Tools
TGAC/grassroots-client-web-field-pathogenomics
Grassroots yellow rust map web client
TGAC/hcxselect
A CSS selector engine for C++
TGAC/indexing_prototypes
TGAC/lssp_dock
TGAC/MetaPipe
An effort-saving pipeline to run a series of QC, alignment and analysis tools on metagenomic sequencing data.
TGAC/MISO-Selenium-Tests
Selenium tests for MISO
TGAC/NanoOK_Example
Example data for NanoOK
TGAC/pipelion
A handy webapp for running system processes (Django)
TGAC/simlims
Old SimLims MISO code
TGAC/subsampler
Small tool to subsample fasta and fastq files.
TGAC/TgacConanProcs
External Tools used at TGAC wrapped as Conan Processes