alexbowe
PhD in Bioinformatics. Creator of Cosmo succinct de Bruijn graph DNA assembler. Early engineer @cruise-automation. Occasional Blogger.
@smoothbrain-ai, @cosmo-team, @cruise-automationSan Francisco
Pinned Repositories
cardgen
Python script to generate flash cards in LaTeX
debby
A demo implementation of Succinct de Bruijn Graphs.
keyphrase
Key phrase extraction using Hadoop + Dumbo + NLTK
leetcode-anki-with-grind75
Anki cards generator for Leetcode
phd-thesis
PhD Thesis: Succinct de Bruijn Graphs
wavelet-paper
Paper based on my thesis on multiary wavelet trees.
cosmo
Cosmo is a fast, low-memory DNA assembler using a Succinct (variable order) de Bruijn Graph.
smoothbrain-anki
SmoothBrain is an Anki plugin that fetches Readwise highlights and makes flashcards using OpenAI GPT.
alexbowe's Repositories
alexbowe/debby
A demo implementation of Succinct de Bruijn Graphs.
alexbowe/keyphrase
Key phrase extraction using Hadoop + Dumbo + NLTK
alexbowe/leetcode-anki-with-grind75
Anki cards generator for Leetcode
alexbowe/debdec
Python library for efficiently decodable de Bruijn sequences (WiP).
alexbowe/multiary-wt
Multiary Wavelet Tree and RRR
alexbowe/LeetCode
My LeetCode Solutions (continuously updated).
alexbowe/phd-thesis
PhD Thesis: Succinct de Bruijn Graphs
alexbowe/wavelet-paper
Paper based on my thesis on multiary wavelet trees.
alexbowe/simplex
Pascal's Simplex generator
alexbowe/resume
My resume generator
alexbowe/pinlv
Tools for learning languages using frequency and graph analysis.
alexbowe/alexbowe
alexbowe/alexbowe.com
alexbowe/Anki-Chess-2.0
An interactive chess template for anki.
alexbowe/arcvile
Pet project to build arc diagrams to show repetitions in Ruby code.
alexbowe/bip_utils
Implementation of BIP39, BIP32, BIP44, BIP49 and BIP84 for generation of crypto-currencies wallets (mnemonic phrases, seeds, private/public keys and addresses)
alexbowe/bitcoin-passphrase-cracker
alexbowe/blog
alexbowe/btcguide.github.io
https://btcguide.github.io/
alexbowe/graffle-export
Command-line utility for exporting OmniGraffle documents
alexbowe/iq-calculator
IQ calculator for use with realiq.online.
alexbowe/leetcode-scraper
Code to scrape and analyze LeetCode
alexbowe/llama-hub-readwise
A library of data loaders for LLMs made by the community -- to be used with GPT Index and/or LangChain
alexbowe/lnbook
Mastering the Lightning Network (LN)
alexbowe/minSH
A minimal Python re-implementation of the A* with seed heuristic for exact global alignmnet (edit distance) in near-linear time
alexbowe/nexus-project
Playing with the Nexus.xyz zkVM
alexbowe/pysdsl
Python bindings to Succinct Data Structure Library 2.0
alexbowe/quick_check
Hacked up quick_check. Will tidy up and provide explanation/examples soon.
alexbowe/Replicators
alexbowe/StringZilla
Up to 10x faster strings for C, C++, Python, Rust, and Swift, leveraging SWAR and SIMD on Arm Neon and x86 AVX2 & AVX-512-capable chips to accelerate search, sort, edit distances, alignment scores, etc 🦖