beast-dev/tracer

Issues

• Tracer discrete value plot issues

  #184 opened 6 months ago by walterxie
  1

• replace MAX_LAG = 2000 to the proportion of sample size (chain length)

  #183 opened 6 months ago by walterxie
  0

• Error in plotting the Bayesian skyline plot

  #168 opened 3 years ago by cinthylorein
  5

• OpenJDK Compatibility?

  #182 opened 7 months ago by bluesky2142
  0

• Error in plotting the Bayesian skyline plot

  #181 opened 7 months ago by MarcioJRC1
  0

• Treat constant traces as special cases

  #180 opened a year ago by rambaut
  0

• Tracer hangs on very low variance traces

  #179 opened a year ago by rbouckaert
  10

• incorrect axis labels in joint-marginal plot

  #178 opened 2 years ago by sav-che
  0

• The legend does not show file names

  #151 opened 2 years ago by maxbiostat
  1

• Issue running on Windows

  #177 opened 2 years ago by jb16159
  1

• Multiple draw in joint marginal panel when selecting multiple logs and traces

  #174 opened 3 years ago by walterxie
  0

• For integer valued variables, tracer produces too many tick marks & labels

  #162 opened 4 years ago by bredelings
  1

• Add mean lines to violin plots

  #127 opened 7 years ago by rambaut
  1

• What to do with categorical values with frequency 0?

  #128 opened 7 years ago by GuyBaele
  1

• Plot options should be specific to each plot

  #138 opened 7 years ago by rambaut
  0

• Offer stacked column charts for discrete densities.

  #139 opened 7 years ago by rambaut
  0

• Add axis font size dropdown to tool bars (or in setup dialogs).

  #141 opened 7 years ago by rambaut
  0

• Show different size credible intervals

  #142 opened 7 years ago by rambaut
  0

• Dark Theme on Mac OS causes readablility issues

  #165 opened 2 years ago by sirno
  1

• Tracer v.1.7.2 visibility issue

  #175 opened 2 years ago by haddocksoto
  8

• bayesian skygrid caution

  #176 opened 2 years ago by gh1of1
  1

• Problem ebsp.log running Coalescent Extended Bayesian Skyline

  #173 opened 3 years ago by arenvale
  2

• Exception while loading jam.java9only.ApplicationAdapter

  #160 opened 3 years ago by walterxie
  0

• Tracer crashes on very small positive values

  #167 opened 3 years ago by bredelings
  3

• failed to load "aqualookandfeel"

  #172 opened 3 years ago by walterxie
  0

• [README] Installation requirements?

  #169 opened 3 years ago by rubyFeedback
  1

• Tracer 1.7.1 does ont open outfiles of G-Phocs

  #153 opened 3 years ago by gscabanne
  11

• Linux 1.7.2 release has bin/tracer file without execute permissions

  #163 opened 4 years ago by bredelings
  1

• Mac release issue

  #161 opened 4 years ago by walterxie
  2

• Unable to open trace.jar

  #152 opened 4 years ago by sunnyEV
  1

• beast build bug to create tracer.jar

  #159 opened 4 years ago by walterxie
  2

• Trace panel is broken after selecting >2 log files

  #150 opened 6 years ago by walterxie
  2

• Tracer v1.1.7 breaks when fontconfig is upgraded

  #149 opened 6 years ago by amilesj
  0

• cannot select multiple parameters in 1.7

  #148 opened 7 years ago by wbsimey
  6

• y-axis labels unreadable in trace view for Real parameters after viewing an Integer

  #145 opened 7 years ago by bredelings
  0

• Seleting multiple traces for visualization

  #147 opened 7 years ago by santiagosnchez
  1

• Reintroduce option for number of bins for histograms of univariate marginal distributions.

  #146 opened 7 years ago by rambaut
  0

• Integer joint marginal filled boxes are too large?

  #143 opened 7 years ago by bredelings
  5

• Should the Integer trace type be auto-detected?

  #144 opened 7 years ago by GuyBaele
  4

• ViolinPlot cannot handle trace having less than 3 values

  #133 opened 7 years ago by walterxie
  3

• Multiple integer traces showing continuous violins

  #140 opened 7 years ago by rambaut
  1

• Joint-marginal integer/integer plots are now messed up

  #126 opened 7 years ago by rambaut
  2

• Colours for trace file, trace file and trace not working

  #129 opened 7 years ago by rambaut
  3

• IntervalsPanel toolbar's "show" drop down list is confusing for integer traces

  #137 opened 7 years ago by walterxie
  1

• DiscreteContinuousJointDensityPanel X Y labels in wrong order

  #136 opened 7 years ago by walterxie
  0

• change trace type is broken

  #135 opened 7 years ago by walterxie
  2

• JointDensityPanel null exception

  #134 opened 7 years ago by walterxie
  1

• Tracer is frozen after clicking Trace tab for a non-real type trace

  #132 opened 7 years ago by walterxie
  2

• Not possible to visualize >1 variable.

  #131 opened 7 years ago by bredelings
  2

• Log files with the same name cause issues with duplication of traces

  #130 opened 7 years ago by rambaut
  1