bergmanlab/drosophila-transposons

Issues

• add machine readable content that says how you wish this to be cited

  #31 opened 2 years ago by egonw
  3

• add new TE canonical sequences from Zanni et al

  #33 opened 4 years ago by cbergman
  0

• add putative D. melanogaster mariner element from Kennedy et al

  #32 opened 5 years ago by cbergman
  0

• Get data from Yu et al (2011)

  #15 opened 12 years ago by cbergman
  4

• "Transposable Element Raw Dataset Repository"

  #26 opened 7 years ago by blaiseli
  0

• About the file: transposons/misc/D_mel_transposon_sequence_set.fa

  #28 opened 7 years ago by BioWu
  2

• Convert EMBL file to FASTA + GFF3

  #12 opened 7 years ago by cbergman
  3

• Resolve ninja / aurora-element naming issue

  #24 opened 9 years ago by cbergman
  0

• FW, ninja-Dsim-like, R1, R2, Xanthias and Y consensus sequences

  #22 opened 7 years ago
  5

• Resolve FlyBase genome annotations for same family with multiple names

  #25 opened 9 years ago by cbergman
  0

• Convert FBgn ids to FBte ids

  #23 opened 9 years ago by cbergman
  2

• Add license

  #21 opened 9 years ago by cbergman
  0

• Make edits identified by Alain Pelisson (June 2014)

  #17 opened 11 years ago by cbergman
  0

• Last record of the embl file lacks an "ID" line

  #16 opened 11 years ago by blaiseli
  2

• Generate list of synonyms for each FlyBase FBte ID

  #14 opened 12 years ago by cbergman
  1

• Generate list of FBte ids in flybase

  #13 opened 12 years ago by cbergman
  1

• Restore TART-A/B/C DNA sequences to canonical set

  #7 opened 12 years ago by cbergman
  0

• Make EMBL file valid EMBL format

  #3 opened 12 years ago by cbergman
  1

• Add telomeric retrotransposons from Villasante Lab

  #5 opened 12 years ago by cbergman
  1

• Add sequences from Styles

  #11 opened 12 years ago by cbergman
  0

• Add Maverick sequence from Feschotte Lab

  #10 opened 12 years ago by cbergman
  0

• Check that Pardue Lab corrections to TART elements have been correctly made in v9.43

  #8 opened 12 years ago by cbergman
  0

• Add Galileo and 1360 sequences from Ruiz Lab

  #9 opened 12 years ago by cbergman
  0

• Remove header information from canonical file and add to project readme

  #2 opened 12 years ago by cbergman
  0

• Get permission from Michael Ashburner to inherit this file and make subsequent updates

  #1 opened 12 years ago by cbergman
  1

• Sync EMBL file with REPBASE accessions

  #6 opened 12 years ago by cbergman
  0

• Split into species specific canonical files

  #4 opened 12 years ago by cbergman
  0