connectomicslab/connectomemapper3

Issues

• Same error in both docker, singularity, and gui

  #239 opened 2 months ago by iPsych
  1

• error when starting cmpbidsappmanager

  #225 opened a year ago by JuergenHaenggi
  2

• Analysis Tutorial susceptible to closed bug fix

  #226 opened a year ago by ldweinstock
  0

• Problem in creating enviornemt.yml

  #224 opened 2 years ago by milad7093
  4

• error reported when I tried to start Connectome Mapper 3 GUI

  #223 opened 2 years ago by lhldrs
  0

• how to use only part of cmtklib

  #222 opened 2 years ago by hugofluhr
  0

• nibabel.trackvis

  #213 opened 2 years ago by override641
  1

• Background scheduler didn't run for a long period (150s), results might be inaccurate

  #214 opened 2 years ago by milad7093
  1

• Adapting Connectomemapper for Windows 10

  #220 opened 2 years ago by IsottaR
  4

• BUG: environment.yml fails to setup broken dependency obspy (Ubuntu 18, Connectomemapper RC4)

  #105 opened 3 years ago by jwirsich
  2

• CMP on singularity cannot execute parcBrainStem and parcHippo BUG

  #216 opened 2 years ago by KyleeCJ
  1

• Extracting connectivity matrix from gpickle

  #218 opened 2 years ago by milad7093
  1

• DOC: Update/add documentation about EEG pipeline

  #203 opened 2 years ago by sebastientourbier
  0

• BUG: Launching cmpbidsappmanager v3.0.4 fails on Ubuntu

  #206 opened 2 years ago by milad7093
  4

• BUG: CMP3 does not work with new nibabel `4.0.0`

  #202 opened 2 years ago by sebastientourbier
  0

• BUG: Problem to make diffusion pipeline config with ACT

  #199 opened 2 years ago by milad7093
  7

• MAINT/DOC: Possibly upgrade datalad version

  #177 opened 2 years ago by jsheunis
  2

• ENH: Integrate the EEG pipeline in `cmpbidsappmanager`

  #153 opened 2 years ago by sebastientourbier
  0

• ENH: Add EEG pipeline to BIDS App

  #152 opened 2 years ago by sebastientourbier
  0

• ENH: Handle session structure in EEG pipeline

  #151 opened 2 years ago by sebastientourbier
  0

• Issue with Singularity Installation

  #215 opened 2 years ago by KyleeCJ
  1

• Possibility of running the incompleted program

  #204 opened 2 years ago by milad7093
  3

• Spelling error in Figure 1

  #193 opened 3 years ago by osorensen
  3

• BUG: Error in anatomical pipeline when using custom parcellation on BIDS dataset with no session

  #180 opened 3 years ago by MeropGont
  8

• BUG: Running `cmpbidsappmanager` just hangs, no GUI appearing

  #171 opened 3 years ago by jsheunis
  8

• CMP-v3.0.3 no any results in /derivatives/cmp-v3.0.3/ , why?

  #176 opened 3 years ago by zyy1219888
  6

• JOSS paper comments

  #161 opened 3 years ago by jsheunis
  0

• BUG: Command to install the conda environment in analysis tutorial wrong

  #185 opened 3 years ago by mschoettner
  0

• BUG: Lausanne 2018 .annot files are not installed with the conda installation

  #186 opened 3 years ago by mschoettner
  1

• BUG: Installing tutorial dataset via ssh fails if user does not have an ssh key setup

  #178 opened 3 years ago by jsheunis
  1

• BUG: File not found `cmtklib/data/parcellation/lausanne2018/rh.lausanne2018.scale3.annot` in the analysis tutorial

  #179 opened 3 years ago by jsheunis
  1

• BUG: Problem with unresponsive menubar of cmpbidsappmanager on Mac OSX

  #173 opened 3 years ago by sebastientourbier
  0

• DOC: Add size of docker image to docs

  #155 opened 3 years ago by jsheunis
  1

• DOC: refer to contributing guidelines in README

  #159 opened 3 years ago by jsheunis
  0

• DOC: possibly use `sphinx-copybutton`

  #157 opened 3 years ago by jsheunis
  0

• BUG: eeg import error when running cmpbidsappmanager (cmp v.3.0.3)

  #150 opened 3 years ago by MeropGont
  4

• ModuleNotFoundError: No module named 'cmp.stages.eeg'

  #160 opened 3 years ago by jsheunis
  2

• DOC: conda environment creation instructions inconsistent

  #158 opened 3 years ago by jsheunis
  0

• LICENSE / COPYRIGHT file content

  #154 opened 3 years ago by jsheunis
  2

• DOC: Add size of docker image to docs

  #156 opened 3 years ago by jsheunis
  0

• DOC: Create a notebook tutorial to show how to read, visualize, and analyze connectome files

  #103 opened 3 years ago by sebastientourbier
  0

• BUG: List of outputs are empty in inspector window of the parcellation and fmri_connectome stages

  #144 opened 3 years ago by sebastientourbier
  0

• ENH: Add carbon tracker that estimates carbon footprint of CMP3

  #138 opened 3 years ago by sebastientourbier
  0

• BUG: Unable to create environment from .yml in Ubuntu 20.04

  #137 opened 3 years ago by MeropGont
  3

• Naming scheme of parcellation .annot files

  #135 opened 3 years ago by mschoettner
  0

• BUG: Impossible to upload `cmp` to PyPI during `v3.0.0` release

  #133 opened 3 years ago by sebastientourbier
  0

• DOCS: Manage contributors with all-contributors.

  #102 opened 3 years ago by sebastientourbier
  0

• REF: Split classes in `cmp.bidsappmanager.gui.py` in different files

  #129 opened 3 years ago by sebastientourbier
  2

• ENH: Python wrapper for singularity run command.

  #113 opened 3 years ago by sebastientourbier
  0

• ENH: Python wrapper for docker run command

  #112 opened 3 years ago by sebastientourbier
  0