Pinned Repositories
datajoint-labbook
DataJoint LabBook is a graphical user interface built using React to facilitate working with DataJoint computational pipelines.
datajoint-matlab
Relational data pipelines for the science lab
datajoint-python
Relational data pipelines for the science lab
datajoint-tutorials
Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples
element-array-ephys
DataJoint Element for Neuropixels analysis with Kilosort
element-calcium-imaging
DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT
element-deeplabcut
DataJoint Element for behavioral analysis with DeepLabCut
mysql-docker
Docker image for MySQL configured to work with DataJoint
workflow-array-ephys
Example DataJoint workflow for Neuropixels analysis with Kilosort
workflow-calcium-imaging
Example DataJoint workflow for multi-photon calcium imaging analysis with CaImAn and Suite2p
DataJoint's Repositories
datajoint/datajoint-matlab
Relational data pipelines for the science lab
datajoint/datajoint-labbook
DataJoint LabBook is a graphical user interface built using React to facilitate working with DataJoint computational pipelines.
datajoint/microns_phase3_nda
nda schema for MICrONS phase3
datajoint/workflow-array-ephys
Example DataJoint workflow for Neuropixels analysis with Kilosort
datajoint/workflow-calcium-imaging
Example DataJoint workflow for multi-photon calcium imaging analysis with CaImAn and Suite2p
datajoint/mym
MySQL API for MATLAB with support for BLOB objects
datajoint/sci-viz
Generic visualization framework for building dashboarding capabilities for DataJoint pipelines.
datajoint/compress-multiphoton
Compression for multiphoton calcium imaging movies and stacks
datajoint/datajoint-elements
DataJoint Elements is a collection of curated computational workflows for neurophysiology experiments.
datajoint/datajoint-docs-original
datajoint/workflow-miniscope
Example DataJoint workflow for miniscope calcium imaging analysis with CaImAn
datajoint/point-cloud-registration
Point Cloud Registration
datajoint/sciops-summit-2024
DataJoint SciOps Summit - Schedule
datajoint/workflow-optogenetics
Example DataJoint workflow for optogenetics research
datajoint/djlab-docker
A docker image optimized for running a JupyterLab environment with DataJoint Python.
datajoint/ccn2023
datajoint/datajoint-file-validator
A framework for validating DataJoint files and filesets
datajoint/djbase-docker
A minimal base docker image with DataJoint Python dependencies installed.
datajoint/ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
datajoint/element-visual-stimulus
DataJoint Element for generating visual stimuli
datajoint/facemap
Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.
datajoint/intanrhdreader
Python reader for .rhd data files
datajoint/intanrhsreader
Python reader for .rhs data files
datajoint/miniconda3-docker
A minimal base docker image with conda.
datajoint/sbxreader
Reader for Neurolabware scanbox files
datajoint/sci-viz-demo
A demonstration of SciViz's latest features included as part of the pipeline visualization framework.
datajoint/sciops-summit-2024-datajoint-101
Course materials for the DataJoint 101 track -- DataJoint SciOps Summit 2024
datajoint/workflow-deeplabcut
Example DataJoint workflow for behavioral analysis with DeepLabCut
datajoint/workflow-session
Example DataJoint workflow for lab, subject and session management
datajoint/workflow-zstack
Example DataJoint workflow for volumetric data analysis using BossDB