dfernandezperez

dfernandezperez's Stars

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.3k24823995

• pachterlab/gget

  🧬 gget enables efficient querying of genomic reference databases

  Language:Python959107175

• crazyhottommy/RNA-seq-analysis

  RNAseq analysis notes from Ming Tang

  Language:Python952787300

• crazyhottommy/ChIP-seq-analysis

  ChIP-seq analysis notes from Ming Tang

  Language:Python7556512295

• crazyhottommy/scRNAseq-analysis-notes

  scRNAseq analysis notes from Ming Tang

  660460162

• pachterlab/ffq

  A tool to find sequencing data and metadata from public databases.

  Language:Python556135047

• crazyhottommy/bioinformatics-one-liners

  Bioinformatics one liners from Ming Tang

  459190128

• LKremer/ggpointdensity

  :chart_with_upwards_trend: :bar_chart: Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.

  Language:R41761826

• zhanghao-njmu/SCP

  An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

  Language:R410813188

• nextflow-io/patterns

  A curated collection of Nextflow implementation patterns

  Language:Nextflow336252070

• crazyhottommy/scATACseq-analysis-notes

  my notes for scATACseq analysis

  1208033

• grst/containerize-conda

  Turn an existing conda environment into a Singularity container

  Language:Python795715

• chimurai/dotfiles

  Language:JavaScript43303

• Barski-lab/workflows

  Community maintained workflows & tools (with examples)

  Language:Common Workflow Language6207

• amitjavilaventura/ATACseq-snakemake

  Snakemake pipeline to run ATAC-seq preprocessing. Still not working

  Language:Python1200