dipy/dipy
DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
PythonNOASSERTION
Pinned issues
Issues
- 5
Issue with CWLS in dki
#3222 opened by samcoveney - 0
- 1
Broken source installation
#3242 opened by wendyfyx - 1
- 0
- 2
Tract profiles in afq example look all wrong
#3175 opened by arokem - 0
Remove`sagital` from de codespell ignore list.
#3223 opened by skoudoro - 3
1.9.0 system test failures
#3165 opened by mr-c - 13
Tissue prior output volumes in random order
#3213 opened by tangwei - 3
Allow to define optional file to fetch
#3190 opened by skoudoro - 4
"Editable" installation broken
#3047 opened by arokem - 6
Improving MPPCA performance
#3193 opened by skoudoro - 0
- 6
scipt.opt.approx_fprime not good enough
#3155 opened by samcoveney - 6
Improve consistency of affine_registration docstring
#3185 opened by FWijanto - 3
- 1
dki_fit errors from divide by zero
#3145 opened by yizhwan - 1
Need specific area zooming for horizon
#3179 opened by Atharva-Shah-2298 - 2
ENH: Add lazy_loader
#3173 opened by alexrockhill - 1
Add `peaks_from_model` to `dipy_fit_dti` CLI
#3122 opened by alexrockhill - 5
ENH: Add neighboring DWI correlation QC metric
#3154 opened by mattcieslak - 0
Simplify or remove the use of mpl_tri in viz module
#3164 opened by skoudoro - 0
Horizon needs a home button which realigns the view to the z slice we are at.
#3152 opened by Atharva-Shah-2298 - 2
- 8
- 5
TissueClassifierHMRF has some argument logic error
#3096 opened by pjsjongsung - 0
conversion of cudipy.align.imwarp.DiffeomorphicMap to dipy.align.imwarp.DiffeomorphicMap
#3136 opened by rajnraj100 - 3
`dipy==1.9.0` is causing our macOS GitHub Actions runners to stall on unrelated `torch` tests
#3125 opened by joshuacwnewton - 1
ENH: Add tutorial comparing vanilla DTI with warping a high-quality scan back to lower resolution dMRI data
#3123 opened by alexrockhill - 0
- 0
[BUG] Include API entries hidden in _public
#3119 opened by alexrockhill - 1
diffusion gradient nonlinearity correction
#3116 opened by dcdeaniii - 0
Fix `get_info` for release package
#3115 opened by skoudoro - 2
Horizon fails with a single channel 4D volume
#3112 opened by pjsjongsung - 3
SH basis legacy option not available for few methods
#3079 opened by karanphil - 3
DKI masking
#2994 opened by samcoveney - 3
Migrating to Keyword Only arguments (PEP 3102)
#3029 opened by skoudoro - 2
Can I use a different sort of dataset and also what if I don't have a bval , I use . mat images format PATCH2Self
#3093 opened by doro041 - 5
Viz Tests failing
#3085 opened by skoudoro - 2
- 0
Horizon - 4D data support - slicing on the 4-th dim
#3075 opened by Garyfallidis - 4
Unclear difference between b0_treshold and tol
#3015 opened by EmmaRenauld - 1
Dipy website incorrect image
#3066 opened by Atharva-Shah-2298 - 3
create a s390x github action
#3044 opened by skoudoro - 1
Using the atlas HCP1065 in DIPY
#3057 opened by neuroheinz - 5
I do not see a way to change step as used by reconst.dti.TensorModel.fit()
#3030 opened by captainnova - 2
- 4
Consider moving your nightly wheel away from the scipy-wheel-nightly (old location) to scientific-python-nightly-wheels
#3032 opened by lesteve - 1
DIPY installation raises Cython warnings
#3003 opened by jhlegarreta - 4