empyriumz

empyriumz's Stars

• f/awesome-chatgpt-prompts

  This repo includes ChatGPT prompt curation to use ChatGPT better.

  Language:HTML113k1.5k015.4k

• lwouis/alt-tab-macos

  Windows alt-tab on macOS

  Language:Swift11k433.5k331

• zedeus/nitter

  Alternative Twitter front-end

  Language:Nim10.1k131934534

• facebookresearch/hydra

  Hydra is a framework for elegantly configuring complex applications

  Language:Python8.8k1291.4k636

• facebookresearch/esm

  Evolutionary Scale Modeling (esm): Pretrained language models for proteins

  Language:Python3.3k65320643

• aqlaboratory/openfold

  Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

  Language:Python2.8k49354550

• FranxYao/chain-of-thought-hub

  Benchmarking large language models' complex reasoning ability with chain-of-thought prompting

  Language:Jupyter Notebook2.6k3834129

• sokrypton/ColabFold

  Making Protein folding accessible to all!

  Language:Jupyter Notebook2k47560495

• Peldom/papers_for_protein_design_using_DL

  List of papers about Proteins Design using Deep Learning

  1.5k1161174

• intel/scikit-learn-intelex

  Intel(R) Extension for Scikit-learn is a seamless way to speed up your Scikit-learn application

  Language:Python1.2k29239175

• sebp/scikit-survival

  Survival analysis built on top of scikit-learn

  Language:Python1.1k23228216

• yandex-research/rtdl

  Research on Tabular Deep Learning: Papers & Packages

  Language:Python902352598

• hpcaitech/FastFold

  Optimizing AlphaFold Training and Inference on GPU Clusters

  Language:Python574177986

• BCG-X-Official/facet

  Human-explainable AI.

  Language:Jupyter Notebook514123046

• square/pysurvival

  Open source package for Survival Analysis modeling

  Language:HTML3531965109

• autonlab/auton-survival

  Auton Survival - an open source package for Regression, Counterfactual Estimation, Evaluation and Phenotyping with Censored Time-to-Events

  Language:Python32497675

• ml-struct-bio/cryodrgn

  Neural networks for cryo-EM reconstruction

  Language:Python3201328376

• tencent-quantum-lab/tensorcircuit

  Tensor network based quantum software framework for the NISQ era

  Language:Python28076479

• zrqiao/NeuralPLexer

  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model

  Language:Jupyter Notebook26765070

• deapplization/awesome-switching

  switching from the *pple ecosystem to Windows / Linux / Android or BSD

  2328410

• project-gemmi/gemmi

  macromolecular crystallography library and utilities

  Language:C++2311718845

• lucidrains/chroma-pytorch

  Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch

  Language:Python15819323

• NorskRegnesentral/shapr

  Explaining the output of machine learning models with more accurately estimated Shapley values

  Language:R146813134

• MI2DataLab/survshap

  SurvSHAP(t): Time-dependent explanations of machine learning survival models

  Language:Jupyter Notebook8161815

• rsanchezgarc/deepEMhancer

  Deep learning for cryo-EM maps post-processing

  Language:Python513318

• DeepGraphLearning/SiamDiff

  Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)

  Language:Python39445

• BioinfoMachineLearning/cryo2struct

  The programs for preprocessing cryo-EM density maps for machine learning

  Language:Python23221

• mostaszewski314/RL_for_optimization_of_VQE_circuit_architectures

  Language:Python18133

• Structurebiology-BNL/CryoFEM

  Deep learning based cryoEM density map feature enhancement

  Language:Python3102

• rowland-208/chonker

  A lightweight package for chunking iterables

  Language:Python1100