fulcrumgenomics/fqtk

Issues

• fqtk demux's usage is full of MarkDown that comes out verbatim on the console

  #34 opened a year ago by tfenne
  0

• Support barcodes that have different lengths

  #29 opened 6 months ago by nh13
  1

• how to obtain demultixepled paired-end reads with same structure as input reads, including cell barcodes / UMIs

  #41 opened 8 months ago by andreiprodan
  2

• Barcodes only in Read 1

  #40 opened 9 months ago by ahish-sujay
  6

• Better error when the sample barcode lengths in the meta do not match the barcode lengths in the read structure

  #31 opened 2 years ago by nh13
  2

• Request for example sample-metadata file

  #36 opened a year ago by JHarrisonEcoEvo
  2

• FQTK fails if reads are too short

  #27 opened a year ago by nh13
  0

• Fails if sample barcodes in the meta.csv are longer than implied by the read structure

  #28 opened 2 years ago by nh13
  0

• New tool: replicate fgbio's SortFastq?

  #3 opened 2 years ago by tfenne
  0

• "Comment in did not have 4 segments" in data from SRA/ENA

  #25 opened 2 years ago by nh13
  0

• Check skipped sequence?

  #21 opened 2 years ago by mschubert
  5

• Tool-chain version of clippy not being honored

  #23 opened 2 years ago by NatPRoach
  2