gamcil/cblaster

Issues

• Error encode in database create.

  #72 opened 3 months ago by Maiya19724
  2

• NT DATABASE support?

  #112 opened 4 months ago by mthang
  0

• OSError: Unable to parse NCBI response

  #104 opened a year ago by GaoSpark
  4

• Repeated failure of search at results retrieving stage:

  #108 opened 6 months ago by jarnie58
  1

• AttributeError: 'NoneType' object has no attribute 'group'

  #96 opened 2 years ago by yye88
  5

• Only 50 clusters output with cblaster_extract

  #109 opened 6 months ago by Foreverloveknowledge
  1

• error with extract_clusters

  #107 opened 7 months ago by corkdagga
  2

• whether the .gb.gz format is used for the making the database?

  #110 opened 5 months ago by Tsingsjeen
  0

• cblaster didn't create .dmnd out file???????

  #91 opened 2 years ago by neelam19051
  8

• cblaster remote error with large clusters

  #98 opened a year ago by HackenDirker
  1

• An auxiliary script that migt help

  #105 opened 9 months ago by AhmedElsherbini
  0

• clinker plot_cluster legend issue

  #103 opened a year ago by MarcosVoutsinos
  0

• Searching genomes without gene predictions

  #102 opened a year ago by kcamnairb
  0

• RuntimeError: No e-mail or NCBI API key found, please run cblaster config

  #101 opened a year ago by brshcbio
  0

• makedb always results in 'sqlite3.OperationalError: database is locked'

  #89 opened 2 years ago by jjsanchezgil
  2

• "zsh: illegal hardware instruction" error

  #99 opened a year ago by andtrum
  3

• creating database failure from specific genbank files

  #100 opened a year ago by yamn29302
  0

• extract_clusters shifting reading frame

  #97 opened 2 years ago by McClenagoat
  0

• Tree plot with 5 hits maximun per specie

  #95 opened 2 years ago by Alvarosmb
  0

• makedb from gbk files

  #93 opened 2 years ago by Tim-Kirkwood
  0

• TypeError: __new__() missing 8 required positional arguments

  #92 opened 2 years ago by Tim-Kirkwood
  0

• Error using makedb with gff and fa files

  #81 opened 2 years ago by Rene-Hoover
  5

• TypeError: unsupported format string passed to NoneType.__format__

  #90 opened 2 years ago by yye88
  5

• Saving session JSON from GUI

  #88 opened 2 years ago by DougSweeney
  0

• problem with context.py

  #85 opened 2 years ago by orlowskamga
  9

• extract_clusters off by a bp

  #83 opened 2 years ago by galacmr
  10

• Error during "Fetching genomic context"

  #84 opened 2 years ago by Adwaith99
  5

• illegal hardware instruction cblaster error

  #82 opened 2 years ago by Pacca97
  0

• not able to proceed with gne and clinker

  #80 opened 3 years ago by pksun1
  3

• Issues with sqlite3 and initiating cblaster

  #79 opened 3 years ago by pksun1
  2

• Local runs fail with `-bat identity -bkey max`

  #76 opened 3 years ago by chasemc
  1

• Detection of Hits not perfect

  #75 opened 3 years ago by JordanVV
  1

• cblaster makedb: error: argument paths: Invalid path:

  #74 opened 3 years ago by JordanVV
  1

• Finding 1 pfam in metagenome

  #73 opened 3 years ago by ElmavWieren
  0

• extracted cluster genbank files have complete gene CDSes not located within nucleotide region

  #71 opened 3 years ago by wittetom
  0

• low sensitibity using local search mode

  #68 opened 3 years ago by yye88
  4

• How do I avoid RecursionError?

  #70 opened 3 years ago by robin84tk
  2

• How to plot output after using "hmm" mode?

  #69 opened 3 years ago by laelbarlow
  2

• database building error

  #67 opened 3 years ago by yye88
  4

• No route to host

  #66 opened 3 years ago by yye88
  0

• installation looking for wheel

  #65 opened 3 years ago by meaghamblin
  0

• Red and orange borders in heat map

  #64 opened 3 years ago by aberaslop
  2

• makedb issue

  #63 opened 3 years ago by azureycy
  1

• error

  #62 opened 3 years ago by AKBode
  3

• ValueError: not enough values to unpack (expected 2, got 0)

  #60 opened 3 years ago by lydia1201
  1

• Extract issu

  #61 opened 3 years ago by Akllarena
  0

• The sequence length affects the final result

  #58 opened 3 years ago by zuoyang97
  0

• No configuration folder detected, please run cblaster config

  #57 opened 3 years ago by zuoyang97
  4

• extract -ig hits?

  #56 opened 4 years ago by mafeeney
  1

• extract error -de expected one argument

  #55 opened 4 years ago by mafeeney
  2