Pinned Repositories
omero.biobank
Biobank: large scale biomedical computation on OMERO
elasticluster
Create clusters of VMs on the cloud and configure them with Ansible.
bioblend
A Python library for interacting with the Galaxy API
bwa_mem_wrapper
Copy of http://toolshed.g2.bx.psu.edu/repos/yufei-luo/bwa_0_7_5, in order to be able to share useful additions to the community.
galaxy4training
Build in a snap a Galaxy environment, on Debian and Ubuntu systems, for shared and highly interactive training sessions.
presta
Presta handles sequencing data produced from a large scale NGS Core facility. It leverages a reliable distributed task queue to create a messages-driven automation system. Presta is focused on real-time operations, but supports scheduling as well.
solida
SOLIDA is command-line solution that facilitate the reproducibility and portability of NGS pipelines. It can easily organize the deployment, the data management and the execution of a Snakemake based workflow.
gmauro's Repositories
gmauro/galaxy4training
Build in a snap a Galaxy environment, on Debian and Ubuntu systems, for shared and highly interactive training sessions.
gmauro/ansible-cvmfs
An Ansible role for installing and configuring CernVM-FS (CVMFS)
gmauro/ansible-docker
Ansible role to install Docker on Ubuntu or Debian systems.
gmauro/ansible-galaxy-os
An Ansible role is for configuring the base operating system useful for running Galaxy.
gmauro/ansible-java
Ansible role to install Java on Ubuntu or Debian systems.
gmauro/ansible-lvm
gmauro/ansible-playonlinux
Ansible role to install PlayOnLinux on Debian or Ubuntu system
gmauro/ansible-postgresql-1
An Ansible role for managing a PostgreSQL server
gmauro/ansible-pulsar
An Ansible role for managing a Pulsar (https://github.com/galaxyproject/pulsar) server.
gmauro/awesome-galaxy-administration
gmauro/cpython
The Python programming language
gmauro/delivery_service
This repo contains an Ansible role to deploy a digital files delivery service consinsting of a WebDAV server (Apache2 enabled) and an FTPES server (Proftpd enabled).
gmauro/docker
Docker base images
gmauro/docker-galaxy-debug
gmauro/galaxy-tools-compchem
:mega: Galaxy Tools for Computational Chemistry
gmauro/glx-containers-lookup-table
gmauro/infrastructure
All of Galaxyproject EU's cloud infrastructure.
gmauro/Marlin-2.0.x
gmauro/mobs
my own backup strategy, enabled by Ansible.
gmauro/multi-package-containers
Testing building mulled containers for multi-requirement tools.
gmauro/pulsar-deployment
gmauro/pulsar-infrastructure
gmauro/pulsar-test-setup
gmauro/rabbitmq-multi-container
RabbitMQ and Flower bundled together in a multi-container Docker application
gmauro/RockPaperScissors
Playing with Python Simple RockPaperScissors Game
gmauro/SARS-CoV-2
gmauro/sorting-hat
UseGalaxy's very magical job sorting system :sparkles:
gmauro/terraform
Various terraform stuff, mostly testing and some incomplete VGCN examples
gmauro/vgcn
Virtual Galaxy Compute Nodes (vgcn)
gmauro/website
UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)