hms-dbmi/vizarr

Issues

• Support OME-zarr labels layers

  #45 opened 4 years ago by will-moore
  12

• Getting TypeError: e.store.get is not a function

  #184 opened 4 months ago by fercer
  7

• How to load local zarr files through imjoy_plugin.py

  #174 opened 4 months ago by jcaxle
  1

• OME-NGFF v0.5 (coordinateSystems) support

  #180 opened 5 months ago by will-moore
  0

• Explore a custom store for tiled

  #177 opened a year ago by manzt
  0

• Image origin in Vizarr

  #171 opened a year ago by aliaksei-chareshneu
  1

• Question about vizarr's mandelbrot demo

  #170 opened a year ago by kephale
  1

• Display of HCS Plate not fully working

  #168 opened 2 years ago by r0f1
  7

• resolution levels not a factor of 2

  #101 opened 3 years ago by will-moore
  2

• Use naming convention for event listener names

  #164 opened 2 years ago by manzt
  0

• Allow to set position via URL

  #161 opened 2 years ago by jstriebel
  1

• Support bioformats2raw layout

  #149 opened 3 years ago by will-moore
  11

• colab notebook not working with zarr

  #152 opened 2 years ago by pieper
  2

• Loading issue for OME-NGFF 0.4 dataset with large number of channels

  #153 opened 2 years ago by sbesson
  2

• Counter-intuitive layer ordering

  #151 opened 3 years ago by oeway
  0

• View OME-NGFF collection of Images

  #123 opened 3 years ago by will-moore
  8

• Channel range widget input

  #147 opened 3 years ago by will-moore
  1

• Issue with tissue image display

  #146 opened 3 years ago by oeway
  4

• Allow setting z/t plane

  #145 opened 3 years ago by oeway
  0

• 3D visualization of volumetric data (e.g. segmentations)

  #142 opened 3 years ago by aliaksei-chareshneu
  3

• View zarr loaded with napari_lazy_openslide

  #143 opened 3 years ago by oeway
  6

• Is it possible to use vizarr for visualizing high-resolution streaming images?

  #121 opened 3 years ago by jmontoyam
  1

• Vizarr demo for Jupyterlab and JupyterLite in the browser

  #134 opened 3 years ago by oeway
  1

• Example image link is broken

  #138 opened 3 years ago by oeway
  3

• Visualzation of ROIs embedded in ome.zarr?

  #127 opened 3 years ago by BioinfoTongLI
  7

• OME-HCS Compatibility with vizarr

  #118 opened 3 years ago by camFoltz
  4

• v0.3 support

  #103 opened 3 years ago by joshmoore
  10

• channel_axis is length undefined

  #114 opened 3 years ago by oeway
  2

• Missing JS assets when running in notebook

  #110 opened 3 years ago by claesenm
  5

• [bug?] `loadWell` loads grid of images at highest resolution

  #76 opened 3 years ago by manzt
  1

• Add more api functions for removing, updating images etc.

  #32 opened 3 years ago by oeway
  2

• Document the ImJoy API

  #34 opened 3 years ago by oeway
  4

• Extract OME-Zarr parsing into sharable JS module

  #69 opened 3 years ago by manzt
  0

• Support lookup table

  #89 opened 4 years ago by oeway
  1

• Unable to visualize a sample zarr with vizarr 0.1

  #92 opened 4 years ago by yarikoptic
  1

• Need to have .zarr in path

  #84 opened 4 years ago by will-moore
  1

• Icon for vizarr

  #35 opened 4 years ago by oeway
  8

• [feature] Reuse zarr metadata from one image for others in plate

  #75 opened 4 years ago by manzt
  3

• Enable text on HCSPlate

  #74 opened 4 years ago by manzt
  0

• Wrong chunk loaded at low-resolutions

  #60 opened 4 years ago by joshmoore
  13

• Add versioned endpoints to gh-pages for more stable URLs

  #59 opened 4 years ago by manzt
  3

• Play with vizarr code

  #61 opened 4 years ago by tischi
  2

• Arbitrary plane slicing

  #62 opened 4 years ago by tischi
  1

• Run prettier on code base

  #54 opened 4 years ago by manzt
  1

• Provide CDN standalone version

  #30 opened 4 years ago by oeway
  6

• URL source encoded

  #55 opened 4 years ago by will-moore
  2

• Plate links open URL with pathname 'vizarr' missing - 404

  #52 opened 4 years ago by will-moore
  0

• Change in CORS behavior

  #46 opened 4 years ago by joshmoore
  5

• Support multi-Z and T dimensions with sliders

  #41 opened 4 years ago by will-moore
  2

• Publish the package on unpkg

  #38 opened 4 years ago by oeway
  1