huzuner
PhD student in the Bioinformatics and Computational Oncology lab @koesterlab
University of Duisburg-EssenGermany
Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
pangolin
Software package for assigning SARS-CoV-2 genome sequences to global lineages.
covariants
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
bioconda-recipes
Conda recipes for the bioconda channel.
bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
dna-seq-varlociraptor
A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
ncov
Nextstrain build for novel coronavirus SARS-CoV-2
rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
snakemake
This is the development home of the workflow management system Snakemake. For general information, see
vg
tools for working with genome variation graphs
huzuner's Repositories
huzuner/bioconda-recipes
Conda recipes for the bioconda channel.
huzuner/bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
huzuner/dna-seq-varlociraptor
A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.