Spanish National Bioinformatics Institute
Alfonso Valencia | BSC, ICREA, INB Director - Salvador Capella-Gutierrez | BSC, INB CTO
Spain
Pinned Repositories
appris
APPRIS - A system for annotating alternative splice isoforms
BIOLITMAP
Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxford Bioinformatics.
etox
Official development repository for LimTox
fega-mm
openVRE
Open Virtual Research Environment
rd-connect-cas-overlay
RD-Connect CAS overlay
SmartRNASeqCaller
SmartRNASeqCaller is a post-processing pipeline to improve germline variant calling from RNA-Seq data
TCGA_benchmarking_workflow
trimal
A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0
WfExS-backend
Workflow Execution Service Backend
Spanish National Bioinformatics Institute's Repositories
inab/tophat2-patches
TopHat2 patches, which fix several Segmentation faults
inab/tdGUI
The Target Dossier (TD) goal is to provide a comprehensive view of pharmacologically relevant targets to answer questions regarding druggability, tissue expression profiles and implications in pathways, disease states and physiological mechanisms.
inab/mean
MEAN (Mongo, Express, Angular, Node) - A Simple, Scalable and Easy starting point for full stack javascript web development - utilizing many of the best practices we've found on the way
inab/appris
APPRIS - A system for annotating alternative splice isoforms
inab/cdw
Clinical Data Warehouse
inab/tdcache-importer
Cache restore from a Mysql database into a memcache server instance
inab/intact-importer
A ruby application in order to import selectively the IntAct database into a local Postgres instance.
inab/TeBactEn
TeBactEn is a tool designed to facilitate the retrieval, extraction and annotation of bacterial enzymatic reactions and pathways from the literature.