ipstone's Stars
jesseduffield/lazygit
simple terminal UI for git commands
cli/cli
GitHub’s official command line tool
helix-editor/helix
A post-modern modal text editor.
exelban/stats
macOS system monitor in your menu bar
gnachman/iTerm2
iTerm2 is a terminal emulator for Mac OS X that does amazing things.
deepmind/alphafold
Open source code for AlphaFold.
sveinbjornt/Sloth
Mac app that shows all open files, directories, sockets, pipes and devices in use by all running processes. Nice GUI for lsof.
zolrath/wemux
Multi-User Tmux Made Easy
BioContainers/containers
Bioinformatics containers
unforswearing/applescript
Applescript applets, snippets, resources, and links
ritschmaster/b3
i3 for Windows
liulab-dfci/TRUST4
TCR and BCR assembly from RNA-seq data
dviraran/SingleR
SingleR: Single-cell RNA-seq cell types Recognition (legacy version)
skaji/remote-pbcopy-iterm2
remote pbcopy for iTerm2
brentp/smoove
structural variant calling and genotyping with existing tools, but, smoothly.
box/boxcli
A command line interface for interacting with the Box API.
igordot/genomics
A collection of scripts and notes related to genomics and bioinformatics
dviraran/xCell
Cell types enrichment analysis
numist/Switch
A window-based context switcher for the Mac
gaalcaras/ncm-R
R autocompletion for Neovim and vim 8 :memo: :bar_chart: :zap:
markowetzlab/Drews2022_CIN_Compendium
Main repository for Drews et al. (Nature, 2022)
viromelab/tracespipe
Reconstruction and analysis of viral and host genomes at multi-organ level
xunchen85/VIcaller
A software to detect virome-wide integrations
LukszaLab/NeoantigenEditing
yuhanH/HPViewer
mshabbirhasan/ups-indel
UPS-indel is a tool for "Universal Positioning System" of indels. It can be used to compare indels to see whether they are biologically equivalent or not. It can also be used to find out redundant indels. Moreover UPS-indel can be used to compare indels called by different tools.
vappiah/bioinfodata
vappiah/vcf-file-manipulation
DennisSchmitz/jovian
Accessible Metagenomics/viromics for public health and clinical domains. Focuses on automation, accessibility and a clear audit trail.
ipstone/modules