jhrcook

B.S. in Biology 🔬 and Chemistry 🧪 Ph.D. in Computational Biology 💻 Computational Genomics Research Scientist at Vertex Pharmaceuticals 💊

Vertex PharmaceuticalsBoston, MA, USA

Pinned Repositories

advent-of-code-2023-rust
My solutions to Advent of Code 2023 (in Rust).
Language:Rust2 1 10
bayesian-data-analysis-course
My notes and work for the Bayesian Data Analysis course taught by Aki Vehtari.
Language:R12 2 28
ggasym
Plots three different color schemes on the top-left and bottom-right triangles and the diagonal of a symmetric matrix
Language:R13 2 173
mustashe
A system for stashing and loading the results of long running computations.
Language:R7 2 204
textrank-streamlit
A web app built with Streamlit that summarizes input text
Language:Python13 2 27
tidy-tuesday
#TidyTuesday to practice data analysis in R
Language:R13 3 05
tumoroscope-pymc
Python package of the 'Tumoroscope' model implemented in PyMC.
Language:Python2 1 20
WaterMe
An iOS application written in SwiftUI to help log when plants were last watered.
Language:Swift7 3 01
Workout-Spinner-watchapp
An Apple Watch App that randomly selects quick exercises.
Language:Swift0 1 30

jhrcook's Repositories

jhrcook/the-effect-notes
Notes on learning causal inference from "The Effect" by Nick Huntington-Klein.
Language:Jupyter Notebook9 2 0
jhrcook/spotify-data-analysis
The analysis of my Spotify streaming data.
Language:HTML8 2 4
jhrcook/mustashe
A system for stashing and loading the results of long running computations.
Language:R7 2 204
jhrcook/100-days-of-rust
Learning the Rust programming language with 100 continuous days of practice.
Language:Rust6 1 50
jhrcook/academic-kickstart
Personal website made user Academic & Hugo, hosted on Netlify
Language:Jupyter Notebook2 1 61
jhrcook/advent-of-code-2023-rust
My solutions to Advent of Code 2023 (in Rust).
Language:Rust2 1 10
jhrcook/doing-bayesian-data-analysis
Language:R1 2 0
jhrcook/fivethirtyeight-riddler
My solutions to the FiveThirtyEight Riddler puzzles
Language:JavaScript1 2 02
jhrcook/FluidPhoto
Fluid photo viewer with zoom transition and interactive transition
Language:Swift1 1 01
jhrcook/jhrcook
GitHub profile
1 2 02
jhrcook/jhrcook-website
Personal website (gen. 3)
Language:Python1 1 0
jhrcook/a-concise-introduction-to-pure-mathematics
My notes on *A Concise Introduction to Pure Mathematics* (4th ed.)
Language:TeX1 0
jhrcook/advent-of-code-2022-rust
Advent of Code 2022 solutions in Rust
Language:Rust
jhrcook/advent-of-code-2024-rust
Advent of Code 2024 (in Rust)
Language:Rust
jhrcook/bin2cell-demo
Demonstration of the 'bin2cell' library for analysis of Visium HD data.
jhrcook/bookshelf-scanner
Language:Python1 1
jhrcook/conference-notes
Notes from various technical and scientific conferences
Language:Jupyter Notebook2 0
jhrcook/cv
My Curriculum Vitae and resumes
Language:HTML2 1
jhrcook/fly-fishing-journal
My journal as I dive into fly fishing.
Language:Python1 0
jhrcook/HeartRateGraphDemo
A demo app while I prototype a graph of heart rate measurements.
Language:Swift2 0
jhrcook/homebridge-control-poc
Proof-of-concept for interacting with the Homebridge API.
Language:Rust
jhrcook/homebridge-controller
A program to execute custom Homebridge controlling programs.
Language:Rust1 9
jhrcook/jhcook-website
My personal website (version 2).
Language:Jupyter Notebook1 2
jhrcook/learn-skimage
Following the tutorials and my own experimentations with 'skimage'
Language:Jupyter Notebook1 0
jhrcook/protein-language-models
Experimenting with protein language model predictions
Language:Python1 0
jhrcook/rustlings
:crab: Small exercises to get you used to reading and writing Rust code!
Language:Rust0 0
jhrcook/ShortSwiftTutorials
My notes from a bunch of short online tutorials about Swift
Language:Swift2 0
jhrcook/SpatialDE
Test genes for Spatial Variation
Language:Jupyter Notebook0 0
jhrcook/split-payments
Splitting costs from Seattle & Olympic NP trip.
Language:Python1 0
jhrcook/SwiftBar-Plugins
My SwiftBar plugins.
Language:Python2 8