jokergoo/EnrichedHeatmap

Issues

• Smoothing methylation data causing very extreme values impacting visualization

  #61 opened 3 years ago by rauldiul
  4

• Can't get the picture

  #59 opened 3 years ago by chenchen-eng
  4

• A heatmap with no signal

  #87 opened 5 months ago by jokergoo
  0

• only use exons as target

  #86 opened 6 months ago by jokergoo
  1

• Modification of the position of color bar

  #84 opened 10 months ago by zixiaowang17
  0

• enriched heatmap cut rows

  #85 opened 10 months ago by yamihn
  0

• Scale two heatmaps with EnrichedHeatmap

  #83 opened 10 months ago by noelletnw
  1

• Image magick error for very large rasters

  #58 opened 3 years ago by RichardJActon
  20

• same y-aixs for concatenated heatmap

  #81 opened a year ago by gyanmishra
  2

• Strange subscript out of bounds error

  #78 opened 2 years ago by yimingsun12138
  1

• Collapsing replicates

  #82 opened a year ago by konsta-kukkonen
  0

• plot multiple bigwig data in one heatmap?

  #62 opened 3 years ago by junjunlab
  2

• how to show partition names at the leftmost when setting 3rd heatmap as main_heatmap

  #79 opened 2 years ago by olechnwin
  1

• strange plot Enrichedheatmap

  #77 opened 2 years ago by yamihn
  0

• Strandness information of signal and targte GRanges seems ignored in the calculation of normalizeToMatrix

  #76 opened 2 years ago by SoManyPepople
  1

• How To? color top annotation lines by row_split variable?

  #69 opened 2 years ago by malcook
  3

• Set order to row_split

  #75 opened 2 years ago by 14stutzmanav
  1

• remove failed_rows from matrix

  #74 opened 2 years ago by Adnanhashim
  1

• Empty matrix

  #73 opened 2 years ago by michela12345
  1

• color for anno_enriched

  #72 opened 2 years ago by olechnwin
  2

• speed up normalizeToMatrix

  #71 opened 2 years ago by olechnwin
  2

• to-do-list

  #70 opened 2 years ago by jokergoo
  0

• Visualize multiple target regions in one graph

  #68 opened 3 years ago by xfchen0912
  2

• Filtering matrices by range name

  #67 opened 3 years ago by jantusan
  5

• strand information

  #66 opened 3 years ago by MorillonLab
  1

• maybe use mode "s" for the average line chart?

  #65 opened 3 years ago by jokergoo
  0

• raster image too blur

  #64 opened 3 years ago by jokergoo
  0

• border line of the target regions

  #63 opened 3 years ago by jokergoo
  0

• Question about target_ratio in normalizeToMatrix

  #57 opened 3 years ago by AstreChen
  2

• mean_mode error

  #60 opened 3 years ago by Jiang-cpu751
  5

• white line in raster

  #54 opened 4 years ago by ClarissaFeuersteinAkgoz
  9

• Trouble with scaling

  #56 opened 4 years ago by wilsoner2175
  5

• Names of heatmap annotation

  #55 opened 4 years ago by dktanwar
  1

• Setting number of breaks

  #51 opened 4 years ago by dktanwar
  9

• annotation_legend_side does not work

  #50 opened 4 years ago by dktanwar
  6

• how to use row_split and add annotation heatmap for the split

  #52 opened 4 years ago by olechnwin
  3

• Is there a way to only plot top curve?

  #53 opened 4 years ago by GRGong
  1

• Question: Setting `lwd` for all heatmaps

  #49 opened 4 years ago by dktanwar
  2

• Height of column title box

  #48 opened 4 years ago by dktanwar
  4

• Problem splitting by more than two groups in newest version (1.18.0)

  #47 opened 5 years ago by dougbarrows
  2

• Strange V Shape when generating heatmap?

  #46 opened 5 years ago by Jome0169
  3

• how can I manually cluster with EnrichedHeatMap?

  #45 opened 5 years ago by Yuxinagli
  1

• output bed regions along with each window coverage/score

  #43 opened 5 years ago by itsvenu
  2

• EnrichedHeatmap() Error: You should have at least two distinct break values.

  #44 opened 5 years ago by francisfa
  3

• About the "row_split" parameter？

  #42 opened 5 years ago by francisfa
  2

• Custom ticks and label position at x-axis

  #40 opened 5 years ago by ATpoint
  1

• Meaning of rows on heatmap

  #39 opened 5 years ago by AYYYang
  1

• Mixed colors in top_annotations

  #38 opened 5 years ago by CharlesJB
  10

• Error in Heatmap(mat, col, row_order = row_order, cluster_columns = FALSE, : unused argument (top_annotation_height = top_annotation_height)

  #41 opened 5 years ago by crazyhottommy
  2

• customer reference genes annotation

  #37 opened 6 years ago by skytguuu
  4