kir1to455

Sun-Yat UniversityGuang zhou

Pinned Repositories

NanoCount
EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2
Language:Python57 4 375
f5c
Ultra-fast methylation calling and event alignment tool for nanopore sequencing data (supports CUDA acceleration)
Language:C149 7 10726
jksb-sysu
中山大学健康申报自动化（Github Actions）
Language:Python0 0 00
LATER
Long-reads-based Alternative Termination Estimation and Recognition (LATER)
Language:R0 0 00
nanopore-methylation-utilities
Language:Python00
dorado
Oxford Nanopore's Basecaller
Language:C++571 32 1.2k68
modkit
A bioinformatics tool for working with modified bases
Language:Rust163 13 3468
pod5-file-format
Pod5: a high performance file format for nanopore reads.
Language:C++140 26 15319
polars
Dataframes powered by a multithreaded, vectorized query engine, written in Rust
Language:Rust31.4k 165 9.6k2k
C.Origami
C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.
Language:Python68 4 279

kir1to455's Repositories

kir1to455/jksb-sysu
中山大学健康申报自动化（Github Actions）
Language:Python0 0 00
kir1to455/LATER
Long-reads-based Alternative Termination Estimation and Recognition (LATER)
Language:R0 0 00
kir1to455/nanopore-methylation-utilities
Language:Python00