koustav-pal/HiCBricks

Issues

• Plotting more than one chromosome at once

  #22 opened 2 years ago by OliverPStuart
  2

• y-axis coordinates and x-axis coordinates are the same

  #18 opened 4 years ago by koustav-pal
  3

• Package failing on Bioconductor

  #20 opened 2 years ago by Kayla-Morrell
  3

• Is "chrs" removed from Create_many_Bricks_from_mcool or Brick_load_data_from_mcool?

  #24 opened 2 years ago by xl5525
  0

• error: invalid 'times' argument

  #23 opened 2 years ago by MichelMoser
  0

• Error running Create_many_Bricks with H5

  #21 opened 2 years ago by TomKellyGenetics
  1

• Pearson correlation matrix

  #19 opened 4 years ago by porpheria
  0

• any suggestion on how to generate aggregate submatrix plot

  #16 opened 4 years ago by yxian9
  2

• If x_axis is false Brick_vizart_plot_heatmap does not plot y_axis

  #17 opened 4 years ago by koustav-pal
  0

• Is it possible to separate Hi-C signal into weights and observed contacts

  #15 opened 5 years ago by koustav-pal
  0

• Add support for HiCExplorer files

  #14 opened 5 years ago by koustav-pal
  0

• Implement Brick container for parallelization

  #8 opened 5 years ago by koustav-pal
  1

• Need help to read in the mcool file converted by hicexplorer

  #12 opened 5 years ago by zhjilin
  1

• Vignette examples cannot be followed

  #13 opened 5 years ago by mdozmorov
  2

• Norm.factor not found

  #7 opened 5 years ago by cmdoret
  3

• problem loading mcool file

  #5 opened 5 years ago by imerelli
  10

• Integrate direct access to .hic files

  #6 opened 6 years ago by koustav-pal
  1

• Show me a Heatmap

  #4 opened 6 years ago by koustav-pal
  1

• Bug when creating a new brick with the same path/name of a previous brick

  #1 opened 6 years ago by koustav-pal
  1