mahmoodlab/Patch-GCN

Issues

• Can the dataset be re-uploaded?

  #35 opened 5 months ago by niuhulu-rui
  1

• Failed to reproduce c-index of 0.58 for LUAD

  #33 opened 8 months ago by wangbo00129
  3

• survival information

  #14 opened 2 years ago by genhao3
  3

• Questions Regarding Censored Data Handling and Case Selection

  #36 opened 4 months ago by BTYAI99
  0

• Graph Construction

  #25 opened a year ago by pazadimo
  1

• AttributeError: 'Tensor' object has no attribute 'keys'

  #26 opened a year ago by ljhOfGithub
  2

• MI-FC reproducibility

  #31 opened 10 months ago by ValentinKoch
  1

• Failed to generate TCGA-HT-7483-01Z-00-DX1.7241DF0C-1881-4366-8DD9-11BF8BDD6FBF.pt

  #32 opened 9 months ago by wangbo00129
  0

• RuntimeError: CUDA out of memory when not skipping large bags

  #28 opened 10 months ago by Raymvp
  3

• About learning rate

  #30 opened 10 months ago by ljhOfGithub
  0

• When running the main file, it shows a missing .pt file.

  #29 opened a year ago by superli6
  0

• "Unable to open object (object 'features' doesn't exist)"

  #13 opened 2 years ago by RMYazdi
  1

• c-index value on validation set is very high

  #16 opened a year ago by genhao3
  12

• unzip error

  #24 opened a year ago by ljhOfGithub
  1

• c-index value on validation set is very high

  #27 opened a year ago by ljhOfGithub
  1

• I want to run MI-FCN. However, I don't know how to get the 'fast_cluster_ids.pkl' file?

  #20 opened 2 years ago by genhao3
  3

• "……csv.zip" files not find

  #21 opened a year ago by Luxiaowen45
  2

• deepattenMISL performance

  #22 opened a year ago by Raymvp
  1

• Some questions about Censorship

  #23 opened a year ago by LITTLEKKKK
  3

• CoxSurvLoss has a lot of bugs

  #19 opened 2 years ago by genhao3
  4

• Code seems not runnable as-is

  #5 opened 3 years ago by jjhbw
  3

• Is the 5 c-index of 5-fold cross-validation averaged to get the final c-index?

  #15 opened 2 years ago by genhao3
  2

• What data does the dataset used contain?

  #12 opened 2 years ago by genhao3
  2

• What's the difference between the two folders dataset_csv and datasets_csv?

  #11 opened 2 years ago by yuanpinz
  3

• Patch-GCN main.py do not work

  #9 opened 3 years ago by liuxiaoping2020
  4

• MI-FCN corresponds to DeepAttnMISL in the paper?

  #17 opened 2 years ago by genhao3
  2

• About TCGA data

  #18 opened 2 years ago by genhao3
  1

• P-Value computation

  #7 opened 2 years ago by RRG29
  3

• Preprocessing steps

  #8 opened 3 years ago by renato145
  1

• BRCA

  #6 opened 3 years ago by szc19990412
  1

• Files missing

  #4 opened 3 years ago by RRG29
  3

• main.py

  #1 opened 3 years ago by szc19990412
  6

• Classification options

  #3 opened 3 years ago by jeroenmollink
  1

• main.py

  #2 opened 3 years ago by HeLongHuang
  1