malonzm1

Pinned Repositories

cellranger
10x Genomics Single Cell Analysis
Language:Rust354 35 22092
STAR
RNA-seq aligner
Language:C1.8k 86 2k504
CellBender
CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.
Language:Python285 10 31352
deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Language:Python3.2k 156 824718
LuxHMM
Language:Python21
Markdown
A small and fast Markdown parser library for Swift.
Language:Swift00
mixcr
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
Language:Kotlin326 32 96379
scRepertoire
A toolkit for single-cell immune profiling
Language:R303 13 34549
anndata
Annotated data.
Language:Python570 14 724152
scanpy
Single-cell analysis in Python. Scales to >1M cells.
Language:Python1.9k 51 1.7k594

malonzm1's Repositories

malonzm1/LuxHMM
Language:Python21
malonzm1/Markdown
A small and fast Markdown parser library for Swift.
Language:Swift00