mchowdh200

mchowdh200's Stars

• posquit0/Awesome-CV

  :page_facing_up: Awesome CV is LaTeX template for your outstanding job application

  Language:TeX22.9k2142844.8k

• Dao-AILab/flash-attention

  Fast and memory-efficient exact attention

  Language:Python13.6k1151k1.2k

• state-spaces/mamba

  Mamba SSM architecture

  Language:Python12.7k1015131.1k

• BlinkDL/RWKV-LM

  RWKV is an RNN with transformer-level LLM performance. It can be directly trained like a GPT (parallelizable). So it's combining the best of RNN and transformer - great performance, fast inference, saves VRAM, fast training, "infinite" ctx_len, and free sentence embedding.

  Language:Python12.5k133210847

• dlvhdr/gh-dash

  A beautiful CLI dashboard for GitHub 🚀

  Language:Go7.1k20172206

• marlonrichert/zsh-autocomplete

  🤖 Real-time type-ahead completion for Zsh. Asynchronous find-as-you-type autocompletion.

  Language:Shell5.3k24512146

• dry-python/returns

  Make your functions return something meaningful, typed, and safe!

  Language:Python3.5k45417116

• srush/Tensor-Puzzles

  Solve puzzles. Improve your pytorch.

  Language:Jupyter Notebook3.2k1220264

• srush/Triton-Puzzles

  Puzzles for learning Triton

  Language:Jupyter Notebook1k101165

• kblin/ncbi-genome-download

  Scripts to download genomes from the NCBI FTP servers

  Language:Python93935144175

• cyberjunky/python-garminconnect

  Python 3 API wrapper for Garmin Connect to get activity statistics

  Language:Python90838139142

• amitds1997/remote-nvim.nvim

  Remote development in Neovim 🔥

  Language:Lua61365813

• HazyResearch/hyena-dna

  Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

  Language:Assembly574216582

• enjalot/latent-scope

  A scientific instrument for investigating latent spaces

  Language:Jupyter Notebook56385419

• instadeepai/nucleotide-transformer

  🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

  Language:Python449225453

• lsmor/snake-fury

  a challenge for Haskell beginners

  Language:Haskell4366535

• lucidrains/enformer-pytorch

  Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch

  Language:Python417173677

• hristo-vrigazov/mmap.ninja

  Memory mapped numpy arrays of varying shapes

  Language:Python27741311

• neherlab/treetime

  Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction

  Language:Jupyter Notebook2231714255

• HampusHauffman/block.nvim

  Language:Lua2076212

• mbhall88/rasusa

  Randomly subsample sequencing reads or alignments

  Language:Rust20663917

• bluenote-1577/sylph

  ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.

  Language:Rust1363146

• kblin/ncbi-acc-download

  Download files from NCBI Entrez by accession

  Language:Python1076258

• yjx1217/simuG

  simuG: a general-purpose genome simulator

  Language:Perl8631812

• agentdr1/LA_MIL

  Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch

  Language:Python22230

• lucidrains/local-attention-flax

  Local Attention - Flax module for Jax

  Language:Python20212

• conceptofmind/vit-flax

  Implementation of numerous Vision Transformers in Google's JAX and Flax.

  Language:Python19201

• jarekbryk/localblast

  A short tutorial on how to run local BLAST.

  19105

• Genomics-HSE/VGsim

  VGsim is a fast and scalable simulator of viral genealogies during global pandemic.

  Language:Cython154108

• iosonofabio/seqanpy

  Fast pairwise sequence alignment using SeqAn, in Python.

  Language:C++13417