ngehlenborg
Faculty @hms-dbmi. Data Visualization. Biomedical Informatics. Genomics. Epigenomics. Cancer Biology. Single-Cell X. EHR UI. mHealth Data.
Harvard Medical SchoolBoston, MA
Pinned Repositories
4dn-policies
Policies for the NIH Common Fund 4D Nucleome Network.
gosling.js
Grammar of Scalable Linked Interactive Nucleotide Graphics
higlass
Fast, flexible and extensible genome browser.
UpSetR
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
viv
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
vitessce
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
ngehlenborg's Repositories
ngehlenborg/pandazzz
A simple experiment to serve content of tabular files through a REST API with Django and pandas.
ngehlenborg/git-demo
Demo repo for git introduction.
ngehlenborg/2017
ngehlenborg/2018
ngehlenborg/biovis_2016
BioVis 2016 Website
ngehlenborg/checkers
Automated checking of best practices for research compendia ✔️
ngehlenborg/clue_hello_world
ngehlenborg/collaboration-tutorial
A mini-tutorial on collaboration.
ngehlenborg/cranlogs
Download Logs from the RStudio CRAN Mirror
ngehlenborg/CSrankings
A web app for ranking computer science departments according to their research output in selective venues.
ngehlenborg/d3
A JavaScript visualization library for HTML and SVG.
ngehlenborg/d3-shape
Graphical primitives for visualization, such as lines and areas.
ngehlenborg/d3-voronoi
Compute the Voronoi diagram of a set of two-dimensional points.
ngehlenborg/django-matrix-provider
ngehlenborg/draco
Visualization Constraints and Weight Learning
ngehlenborg/git-paper-experiment
A test repository to explore git for scientific data analysis and scientific writing.
ngehlenborg/higlass-v1.5-example
Just an example on how to use the new global mouse position feature in HiGlass v1.5
ngehlenborg/ieeevis.org
Website for ieeevis.org
ngehlenborg/Intro-to-R
Intro to R course materials for BCMP retreat 2015
ngehlenborg/jekyll-uswds
A Jekyll theme for the U.S. Web Design Standards
ngehlenborg/lisacharlotterost.github.io
My personal website, built on Hyde/Poole.
ngehlenborg/open-science-prize
Auxiliary infrastructure for the Open Science Prize
ngehlenborg/scifigure
R package for generating a reproducibility/replicability study comparison visualization
ngehlenborg/scifigure-utils
Utilities for the scifigure package.
ngehlenborg/upset
CFDE programs Upset
ngehlenborg/web-design-standards
Open source UI components and visual style guide for U.S. government websites
ngehlenborg/website
ngehlenborg/workspace_tutorial