rec3141

rec3141's Stars

• OpenGene/fastp

  An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

  Language:C++1.9k50522334

• cesium-ml/cesium

  Machine Learning Time-Series Platform

  Language:Python67133115101

• KlugerLab/FIt-SNE

  Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

  Language:C++5923675108

• benanne/kaggle-ndsb

  Winning solution for the National Data Science Bowl competition on Kaggle (plankton classification)

  Language:Python566414199

• jkrijthe/Rtsne

  R wrapper for Van der Maaten's Barnes-Hut implementation of t-Distributed Stochastic Neighbor Embedding

  Language:C++256194566

• miso-lims/miso-lims

  MISO: An open-source LIMS for NGS sequencing centres

  Language:Java2561823498

• Dandarawy/Unity3D-Globe

  Unity3D Implementation of Chrome Experiment WebGL Globe

  Language:C#17416165

• ropensci-archive/umapr

  :no_entry: ARCHIVED :no_entry: Wraps UMAP Algorithm for Dimension Reduction

  Language:R112152516

• jonathanlilly/jLab

  A Matlab toolbox for big data analysis, signal processing, mapping, and oceanographic applications.

  Language:MATLAB108161335

• ProjectMOSAIC/mosaic

  Project MOSAIC R package

  Language:HTML93777726

• NICTA/cesium-vr

  Plugin for Cesium web-based virtual globe software to support the Oculus VR headset

  Language:JavaScript8117753

• pr2database/pr2database

  Protist Ribosomal Reference database (PR2) - SSU rRNA gene database

  Language:R7912447

• yaolubrain/ULNNO

  Unsupervised Learning on Neural Network Outputs

  Language:Python739116

• linsalrob/PhiSpy

  Prediction of prophages from bacterial genomes

  Language:Jupyter Notebook71105421

• patrickwest/EukRep

  Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets

  Language:Python6922012

• ropensci/taxonomy

  taxonomy R packages

  Language:HTML43594

• dereneaton/pyrad

  Assembly and analysis of RADseq data sets

  Language:Python2782216

• Askarbek-orakov/ASAR

  Advanced metagenomic Sequence Analysis in R

  Language:R15869

• lanzen/CREST

  CREST - Classification Resources for Environmnetal Sequence Tags, is a collection of software and databases for taxonomic classification of environmental marker genes from sequencing-based community profiling studies.

  Language:Python124112

• mortonjt/ancomP

  Analysis of Composition of Microbiomes

  Language:Python11762

• dgrtwo/OASIS

  Optimized Annotation System for Insertion Sequences

  Language:Python10424

• mymess/Planetarium

  A Unity made planetarium

  Language:C#8232

• vaulot/R_tutorials

  Tutorials for R

  Language:HTML6415

• cmbio/hirbin

  Hirbin repository

  Language:Python5200

• dholstius/nmea

  R package for parsing NMEA sentences

  Language:R4101

• grayfall/pymmds

  Extendible metric MDS in Python

  Language:Python3213

• mmdavid/FOAM

  script to run FOAM

  Language:Python3232

• Virome-Collaboration-Group/virome-DIY

  VIROME Do It Yourself Analysis Pipeline

  Language:Perl3601

• abiswas-odu/ISQuest

  ISQuest

  Language:C++1221

• hurwitzlab/imicrobe-mash-node2vec

  Scripts to learn and cluster a vector-space embedding on all-vs-all iMicrobe MASH distance matrix.

  Language:Shell1300