remerjohnson

remerjohnson's Stars

• litestar-org/litestar

  Production-ready, Light, Flexible and Extensible ASGI API framework | Effortlessly Build Performant APIs

  Language:Python5.8k431.2k387

• pyenv-win/pyenv-win

  pyenv for Windows. pyenv is a simple python version management tool. It lets you easily switch between multiple versions of Python. It's simple, unobtrusive, and follows the UNIX tradition of single-purpose tools that do one thing well.

  Language:VBScript5.2k39431471

• malloydata/malloy

  Malloy is an experimental language for describing data relationships and transformations.

  Language:TypeScript2k2958677

• pydot/pydot

  Python interface to Graphviz's Dot language

  Language:Python93324260158

• amirziai/flatten

  Flatten JSON in Python

  Language:Python5441050100

• baztian/jaydebeapi

  JayDeBeApi module allows you to connect from Python code to databases using Java JDBC. It provides a Python DB-API v2.0 to that database.

  Language:Python36817189149

• monarch-initiative/mondo

  Mondo Disease Ontology

  Language:Jupyter Notebook237113.7k54

• INCATools/ontology-development-kit

  Bootstrap an OBO Library ontology

  Language:Jinja2312254453

• geneontology/go-ontology

  Source ontology files for the Gene Ontology

  Language:Makefile2253720.4k40

• nofoobar/JobBoard-Fastapi

  A job board app using fastapi

  Language:Python1794456

• litestar-org/litestar-pg-redis-docker

  Example Litestar project using Postgresql, Redis and Docker

  Language:Python15795326

• ernestojimenezruiz/logmap-matcher

  LogMap: An Ontology Alignment and Alignment Repair System

  Language:Java124102732

• ORCID/python-orcid

  Python wrapper around ORCID API

  Language:Python92232126

• ncbo/umls2rdf

  These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

  Language:Python84253437

• related-sciences/nxontology

  NetworkX-based Python library for representing ontologies

  Language:Python844118

• binder-examples/jupyter-rise

  Auto-launching the RISE plugin for Binder presentations.

  Language:Jupyter Notebook744335

• IntelPython/mkl-service

  Python hooks for Intel(R) Math Kernel Library runtime control settings.

  Language:Cython7261835

• biopragmatics/biomappings

  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.

  Language:Jupyter Notebook5184913

• mapping-commons/sssom-py

  Python toolkit for SSSOM mapping format

  Language:Python49624512

• dwslab/melt

  MELT - Matching EvaLuation Toolkit

  Language:Java48105412

• cmungall/sparqlprog

  logic programming with SPARQL

  Language:Prolog47947

• fastobo/fastobo-py

  Faultless AST for Open Biomedical Ontologies in Python.

  Language:Rust272124

• chenzxlabhzau/pyMeSHSim

  a module to calculate the MeSH similarity

  Language:HTML251510

• luozhhub/pyMeSHSim

  a module to calculate the MeSH similarity

  Language:HTML24304

• Project-TAPIR/pidgraph-notebooks

  Jupyter notebooks with examples of querying different PID graphs and providers like OpenAlex, FREYA PID Graph, OpenAIRE, ORCID, ROR, Crossref. Developed at TIB as part of the BMBF funded project TAPIR.

  Language:Jupyter Notebook221015

• monarch-initiative/kboom

  Bayes OWL Ontology Merging

  Language:Java211011

• codemation/easyschedule

  Easily schedule single or recurring sync/async tasks

  Language:Python18231

• monarch-initiative/monarch-disease-ontology-RETIRED

  THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build

  Language:Prolog17214149

• ccb-hms/ontology-mapper

  a tool for mapping free-text descriptions of entities to ontology terms

  Language:Python155243

• KRR-Oxford/OntoAlign

  Codes relevant to ontology alignment

  Language:Python12403