rosemckeon/ploidy

Issues

• Write 800 word report

  #73 opened 5 years ago by rosemckeon
  0

• Run the simulations

  #61 opened 5 years ago by rosemckeon
  45

• Submit package to CRAN

  #106 opened 5 years ago by rosemckeon
  0

• Put the sim data in different repository

  #105 opened 5 years ago by rosemckeon
  5

• Prepare 10 minute presentation

  #78 opened 5 years ago by rosemckeon
  14

• Free up memory

  #103 opened 5 years ago by rosemckeon
  9

• Improve cloning

  #88 opened 5 years ago by rosemckeon
  0

• Incorporate delayed maturity of polyploids

  #100 opened 5 years ago by rosemckeon
  0

• Consider including allopolyploids

  #104 opened 5 years ago by rosemckeon
  0

• Model a realistic system of costs and benefits

  #102 opened 5 years ago by rosemckeon
  5

• Allow polyploids to have increased ovule number

  #101 opened 5 years ago by rosemckeon
  0

• Improve disturbance

  #89 opened 5 years ago by rosemckeon
  0

• Enable dormancy

  #98 opened 5 years ago by rosemckeon
  0

• Improve check_germination

  #95 opened 5 years ago by rosemckeon
  12

• Make package install without errors

  #77 opened 5 years ago by rosemckeon
  6

• Change default parameters to good null values.

  #97 opened 5 years ago by rosemckeon
  0

• check wrapping for pollen range

  #96 opened 5 years ago by rosemckeon
  1

• Work out how to spatially plot changes in population demographics over time so that they can be animated from the presentation.

  #82 opened 5 years ago by rosemckeon
  0

• Find out why adult population does not increase

  #93 opened 5 years ago by rosemckeon
  1

• Create life cycle graph

  #81 opened 5 years ago by rosemckeon
  3

• Get rid of juveniles at same location when an adult becomes established.

  #92 opened 5 years ago by rosemckeon
  0

• Alter grid size.

  #94 opened 5 years ago by rosemckeon
  0

• Find out how NAs are getting in the data

  #91 opened 5 years ago by rosemckeon
  2

• Make sure populate landscape gives individuals IDs starting with 1

  #90 opened 5 years ago by rosemckeon
  0

• Stop germination on cells populated with adult(s)

  #87 opened 5 years ago by rosemckeon
  0

• Start using Git Large File Storage

  #86 opened 5 years ago by rosemckeon
  1

• Plot inbreeding coefficients

  #80 opened 5 years ago by rosemckeon
  2

• Decide the germination fate of zygotes before genomes added to seeds

  #85 opened 5 years ago by rosemckeon
  0

• Make sure seed survival only affects those that do not germinate

  #84 opened 5 years ago by rosemckeon
  0

• Rename seedlings as juveniles

  #79 opened 5 years ago by rosemckeon
  0

• Include parameter explanations for log options in disturploidy man page.

  #83 opened 5 years ago by rosemckeon
  0

• Sort out package man pages

  #76 opened 5 years ago by rosemckeon
  0

• Warning message: In UseMethod("depth") :

  #74 opened 5 years ago by rosemckeon
  1

• Double/triple check everything is working as I want.

  #72 opened 5 years ago by rosemckeon
  3

• Near extinction event not caught

  #75 opened 5 years ago by rosemckeon
  1

• Take N out of population data.

  #67 opened 5 years ago by rosemckeon
  0

• Rename function `select` to `hard_select` and remove the `dplyr::select` calls

  #71 opened 5 years ago by rosemckeon
  0

• Make ramets move to an adjacent cell and change K to 1.

  #65 opened 5 years ago by rosemckeon
  0

• Add stopifnot rules and param descriptions to disturploidy

  #66 opened 5 years ago by rosemckeon
  0

• Stop infinite values appearing for growth rate

  #59 opened 5 years ago by rosemckeon
  3

• Simulations > 1 have more seedlings germinating than should be possible

  #70 opened 5 years ago by rosemckeon
  3

• Fix error in `reproduce` when no zygotes are created.

  #68 opened 5 years ago by rosemckeon
  0

• Improve model output

  #63 opened 5 years ago by rosemckeon
  2

• Get rid of ID coercing errors on bind_rows in reproduce

  #57 opened 5 years ago by rosemckeon
  2

• Change ova to ovule

  #50 opened 5 years ago by rosemckeon
  0

• Make sure genome values are capped at 100

  #56 opened 5 years ago by rosemckeon
  0

• Complete get_growth_rate based on Brad's feedback

  #55 opened 5 years ago by rosemckeon
  0

• remove check for loci in `grow`

  #54 opened 5 years ago by rosemckeon
  0

• Output data before survival

  #52 opened 6 years ago by rosemckeon
  0

• Seeds should not be included in population control

  #51 opened 6 years ago by rosemckeon
  0