Pinned Repositories
removestar
Tool to automatically replace 'import *' in Python files with explicit imports
safepy
Python implementation of Spatial Analysis of Functional Enrichment (SAFE)
adjustText
A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.
Aneuploidy_dependencies
scripts for plots
beditor
A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more
chrov
🧬Chromosome Visualizations
dseq
dseq: Deep sequencing analysis in dataframes
htsimaging
🔬Python package for high-throughput single-cell imaging analysis.
parag
parag🎆Interactive visualization of higher-order graphs in Python
roux
🧰Convenient functions in Python.
rraadd88's Repositories
rraadd88/htsimaging
🔬Python package for high-throughput single-cell imaging analysis.
rraadd88/adjustText
A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.
rraadd88/Aneuploidy_dependencies
scripts for plots
rraadd88/bredictor
for prediction of base editing outcomes
rraadd88/DnaFeaturesViewer
:eye: Python library to plot DNA sequence features (e.g. from Genbank files)
rraadd88/yeast_segmentation
[This fork allows user-friendly command-line usage] User friendly mask-rcnn segmentation for images of yeast cells
rraadd88/dndscv
dN/dS methods to quantify selection in cancer and somatic evolution
rraadd88/drugz
DRUGZ software
rraadd88/gnt
rraadd88/hts_matlab
matlab scripts for analysis of HT-screens. (deprecated).
rraadd88/jupyter2slides
Cloud Native Presentation Slides with Jupyter Notebook + Reveal.js
rraadd88/kipoi
Kipoi's model zoo API
rraadd88/Kipoi-GWAS
rraadd88/masonry
rraadd88/pdfannots
Extracts and formats text annotations from a PDF file
rraadd88/pitter
Python implementation of gitter
rraadd88/printor
rraadd88/prodigy
Repository containing various scripts to predict the binding affinity of protein-protein complexes from structure
rraadd88/safe-data
Contains the sample input and output files for SAFE demos and tutorials
rraadd88/scHumanNet
Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
rraadd88/scikit-image
Image processing in Python
rraadd88/skimage-web
scikit-image web page sources
rraadd88/straw
Extract data quickly from Juicebox via straw
rraadd88/tinkerer
Python blogging engine
rraadd88/UpSetPlot
Draw UpSet plots with Matplotlib
rraadd88/wavemaker-cards-v4
[This fork's 'ui-suggestions' branch contains UI-related suggestions] The Version 4 release of wavemaker - Nov 2022