Pinned Repositories
tailfindr
An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.
salmon
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
m6anet
Detection of m6A from direct RNA-Seq data
xpore
Identification of differential RNA modifications from nanopore direct RNA sequencing
nanopolish
Signal-level algorithms for MinION data
IsoformSwitchAnalyzeR
An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)
swan_vis
A Python library to visualize and analyze long-read transcriptomes
modkit
A bioinformatics tool for working with modified bases
biobit2
thesis_scripts
Scripts for thesis and related analyses
rugilemat's Repositories
rugilemat/biobit2
rugilemat/thesis_scripts
Scripts for thesis and related analyses