shimlab/BLAZE

Issues

• Split-seq single cell barcoding method demultipexing

  #21 opened 2 months ago by vasikara17
  1

• Input fastq file

  #22 opened a month ago by andreanperry
  1

• putative_bc labelled reads instead of matched_reads

  #19 opened 2 months ago by avilella
  16

• Fastq size drops after Blaze

  #15 opened 3 months ago by rania-o
  10

• Support for 5' 10X kits

  #13 opened 9 months ago by EdGreen21
  4

• strand orientation

  #18 opened 4 months ago by sparthib
  1

• Cannot save file into a non-existent directory

  #16 opened 5 months ago by nick-youngblut
  1

• Can I use this pipeline with a different Adapter Sequence?

  #12 opened 10 months ago by ShaowenJ
  3

• Conda or other Containers availablility

  #9 opened a year ago by atrull314
  2

• Error in running BLAZE through virtualenv

  #14 opened 8 months ago by anshulbudhraja
  2

• BLAZE to FLAMES

  #11 opened a year ago by m-noonan
  5

• Whitespace is not allowed in the sequence

  #10 opened a year ago by m-noonan
  1

• about guppy

  #8 opened a year ago by junhaiqi
  1

• Considerations for UMI correction

  #4 opened a year ago by lingminhao
  1

• Quantile-based threshold

  #6 opened a year ago by lingminhao
  3

• minQ option has no effect

  #5 opened 2 years ago by andrewprzh
  2

• putative barcode list minQ column bug

  #3 opened 2 years ago by lingminhao
  5

• Error in running blaze

  #2 opened 2 years ago by lingminhao
  2