vasikara17

Pinned Repositories

• IsoQuant

  Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)

  Language:Python1541320714

• scWGCNA

  scWGCNA

  Language:HTML5631910

• SQANTI3

  Tool for the Quality Control of Long-Read Defined Transcriptomes

  Language:HTML2011029051

• scasa

  SCASA: Single cell transcript quantification tool

  Language:R194174

• CellChat

  R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

  Language:R320226654

• FLAMES

  A framework for performing single-cell and bulk read full-length analysis of mutations and splicing.

  Language:C++253419

• BLAZE

  SingleCell Nanopore sequencing data analysis

  Language:Python536207

• hdWGCNA

  High dimensional weighted gene co-expression network analysis

  Language:R371533336

• scvelo

  RNA Velocity generalized through dynamical modeling

  Language:Python42113801104

• DTUrtle

  Perform differential transcript usage (DTU) analysis of bulk or single-cell RNA-seq data. See documentation at:

  Language:R182283

vasikara17's Repositories