tommyfuu

tommyfuu's Stars

• matterport/Mask_RCNN

  Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow

  Language:Python25k5792.8k11.7k

• chatwoot/chatwoot

  Open-source live-chat, email support, omni-channel desk. An alternative to Intercom, Zendesk, Salesforce Service Cloud etc. 🔥💬

  Language:Ruby22.9k2464.6k4.1k

• hgrecco/pint

  Operate and manipulate physical quantities in Python

  Language:Python2.5k451.3k479

• salesforce/ctrl

  Conditional Transformer Language Model for Controllable Generation

  Language:Python1.9k6278208

• hashirshoaeb/home

  The personal website/portfolio template by Hashir Shoaib. Built using React and Bootstrap.

  Language:JavaScript1.4k13591.7k

• kemaloksuz/ObjectDetectionImbalance

  Lists the papers related to imbalance problems in object detection [TPAMI]

  1.1k714174

• alvinwan/neural-backed-decision-trees

  Making decision trees competitive with neural networks on CIFAR10, CIFAR100, TinyImagenet200, Imagenet

  Language:Python6171726131

• const-ae/ggsignif

  Easily add significance brackets to your ggplots

  Language:R6021410443

• oschwengers/bakta

  Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

  Language:Python4931325360

• openbiox/awosome-bioinformatics

  A curated list of resources for learning bioinformatics.

  473284124

• ablab/quast

  Genome assembly evaluation tool

  Language:AMPL4224024280

• pokaxpoka/deep_Mahalanobis_detector

  Code for the paper "A Simple Unified Framework for Detecting Out-of-Distribution Samples and Adversarial Attacks".

  Language:Python34492078

• ropensci/biomartr

  Genomic Data Retrieval with R

  Language:R218139229

• slowkow/harmonypy

  🎼 Integrate multiple high-dimensional datasets with fuzzy k-means and locally linear adjustments.

  Language:Python21753022

• hanskrupakar/COCO-Style-Dataset-Generator-GUI

  A simple GUI-based COCO-style JSON Polygon masks' annotation tool to facilitate quick and efficient crowd-sourced generation of annotation masks and bounding boxes. Optionally, one could choose to use a pretrained Mask RCNN model to come up with initial segmentations.

  Language:Python14491331

• omegafragger/DDU

  Code for Deterministic Neural Networks with Appropriate Inductive Biases Capture Epistemic and Aleatoric Uncertainty

  Language:Jupyter Notebook13651124

• cellgeni/scRNA.seq.course

  Analysis of single cell RNA-seq data course

  Language:TeX1323057

• cBioPortal/GSoC

  Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects

  1303711344

• FrederickHuangLin/ANCOMBC

  Differential abundance (DA) and correlation analyses for microbial absolute abundance data

  Language:R120622229

• snowdj/CS228_PGM

  🌀 Stanford CS 228 - Probabilistic Graphical Models

  Language:Python812028

• ICGC-TCGA-PanCancer/TumorType-WGS

  Classifying tumor types based on Whole Genome Sequencing (WGS) data

  Language:R4810522

• SmritiChawla/Precily

  Language:R301215

• wdl2459/ConQuR

  Batch effects removal for microbiome data via conditional quantile regression

  Language:R271254

• bsml320/VAEN

  A deep generative neural network based approach to impute drug response

  Language:R181415

• ruppinlab/tcga-microbiome-prediction

  Predictive models and analysis of cancer prognosis and drug response using primary tumor microbial abundances derived from WGS and RNA-seq sequencing data for 32 TCGA cancers (Poore et al. Nature 2020), including equivalent models using TCGA RNA-seq gene expression and combined microbial abundance and gene expression for comparison.

  Language:Python16109

• biobakery/anpan

  Language:R9621

• MetaSUB-CAMP/camp_short-read-quality-control

  Language:HTML43163

• tommyfuu/BioCalculator

  Creating a calculator for common molecular biology lab experiments.

  Language:Python3102

• tommyfuu/BioFoundry

  BioFoundry Project at the HMC BioMakerspace

  Language:Python2200

• tommyfuu/MetaDiversityTutorial

  Incredibly simple tutorial for conducting alpha diversity and beta-diversity analysis, visualization, and group-wise comparison in R.

  Language:HTML1100