wshuai294/PStrain

Issues

• Error: File truncated at line 1 Could not build fai index out/test//ref//merged_ref.fa.fai

  #14 opened 8 months ago by sahilrishav2
  26

• Error running PStrain_V30.py script

  #13 opened 8 months ago by sahilrishav2
  19

• A snippet offering a for-loop based config construction script

  #8 opened 2 years ago by ctseto
  1

• Reproducibility

  #12 opened 3 years ago by andrewjmc
  5

• Threading and parallelisation across species

  #11 opened 3 years ago by andrewjmc
  12

• Use existing metaphlan3 run

  #10 opened 3 years ago by andrewjmc
  5

• metaphlan3 support?

  #1 opened 3 years ago by nick-youngblut
  5

• --similarity cutoff default

  #9 opened 3 years ago by ShriramHPatel
  1

• How to make a marker gene?

  #3 opened 4 years ago by zckoo007
  1

• Java version for GATK?

  #7 opened 4 years ago by yuxiangtan
  2

• Auto detection of dependenies

  #6 opened 4 years ago by yuxiangtan
  1

• The strain_RA.txt different from the intermediate metaphlan2_output.txt

  #5 opened 4 years ago by weiting-liang
  4

• Could not build fai index ./output/test//ref//merged_ref.fa.fai

  #4 opened 4 years ago by weiting-liang
  4

• Tutorial issues with gzip files

  #2 opened 4 years ago by ctseto
  1