zhoulitom

zhoulitom's Stars

• programthink/zhao

  【编程随想】整理的《太子党关系网络》，专门揭露赵国的权贵

  Language:Python13.7k7085142.8k

• MouseLand/cellpose

  a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

  Language:Jupyter Notebook1.5k28956437

• theislab/single-cell-tutorial

  Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

  Language:Jupyter Notebook1.5k44101471

• duerrsimon/bioicons

  A library of free open source icons for science illustrations in biology and chemistry

  Language:Vue1.4k174982

• hbctraining/scRNA-seq_online

  Language:R57313102194

• welch-lab/liger

  R package for integrating and analyzing multiple single-cell datasets

  Language:R4082119379

• MouseLand/suite2p

  cell detection in calcium imaging recordings

  Language:Jupyter Notebook37318910248

• security-cheatsheet/cmd-command-cheat-sheet

  CMD - Command Cheat Sheat ✅

  28413565

• KirstieJane/STEMMRoleModels

  Inspire future generations by providing the most exciting and diverse speakers for your conference.

  Language:HTML2802871150

• brianhie/scanorama

  Panoramic stitching of single cell data

  Language:Python27669249

• ZJUFanLab/scCATCH

  Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

  Language:R22656538

• BaderLab/CellAnnotationTutorial

  Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods

  Language:HTML9118326

• tractatus/wholebrain

  R package for segmentation, registration and generating web-based brain atlases from microscope images

  Language:C++8894942

• deweylab/CellO

  CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology

  Language:Jupyter Notebook6552514

• kushalkolar/MESmerize

  Platform for Calcium Imaging analysis. DEPRECATED.

  Language:Python60106913

• easy-electrophysiology/easy-electrophysiology-analysis

  Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)

  Language:Python16323

• LucasESBS/scoreCT

  scoreCT: Automated Cell Type Annotation

  Language:Jupyter Notebook15477

• LucasESBS/vega

  VEGA: VAE Enhanced by Gene Annotations

  Language:Python15102

• UCSF-DSOS/scRNA_seq

  scRNA seq analysis using Seurat V3

  Language:R13402

• UCSF-DSOS/bulk_RNA_seq

  RNA seq analysis using Bioconductor (analysis built on limma, edgeR)

  Language:R10403

• dervinism/minis

  'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/currents in whole-cell patch clamp recordings and to estimate the quantal size in the central synapse.

  Language:MATLAB9212

• carmensandoval/singlecell-neocortex-arealization

  Language:R8112

• parkgilbong/Minhee_Analysis_Pack

  Repository for LabVIEW VIs of Minhee Analysis Pack

  Language:Rich Text Format8

• seq-lang/seq-benchmarks

  Language:Python8300

• conda-forge/r-seurat-feedstock

  A conda-smithy repository for r-seurat.

  Language:Shell62

• xhxuciedu/SysBioShortCourse

  Language:Jupyter Notebook52030

• songjiajia2018/ppl

  Language:Shell312

• tsteelejohnson91/LAmbDA

  Contains the code for the Label Ambiguous Domain Adaptation (LAmbDA) method.

  Language:Python3110

• kriegstein-lab/prenatal-brain-sarscov2-2021

  1201

• zhoulitom/CellO

  CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology

  Language:Jupyter Notebook1000