10x Genomics

Pinned Repositories

bamtofastq
Convert 10x BAM files to the original FASTQs compatible with 10x pipelines
Language:Rust59 15 326
cellranger
10x Genomics Single Cell Analysis
Language:Rust367 35 22394
loupeR
Convert Seurat objects to 10x Genomics Loupe files.
Language:R101 10 5315
rust-boomphf
Fast and scalable minimal perfect hashing for massive key sets
Language:Rust137 19 1427
rust-debruijn
De Bruijn graphs in Rust
Language:Rust63 24 517
scHLAcount
Count HLA alleles in single-cell RNA-seq data
Language:TeX59 7 2212
single-cell-3prime-paper
Language:R83 21 535
subset-bam
Language:Rust70 13 1610
supernova
10x Genomics Linked-Read Diploid De Novo Assembler
Language:C++64 13 726
vartrix
Single-Cell Genotyping Tool
Language:Rust200 18 6326

10x Genomics's Repositories

10XGenomics/supernova
10x Genomics Linked-Read Diploid De Novo Assembler
Language:C++64 13 726
10XGenomics/single-cell-3prime-snp-clustering
Language:Python22 23 48
10XGenomics/supernova-chili-pepper
Language:C++2 16 02
10XGenomics/hts
biogo high throughput sequencing repository
Language:Go1 6 01
10XGenomics/pyBigWig
A python extension for quick access to bigWig and bigBed files
Language:C1 5 0
10XGenomics/tsne
A python wrapper for Barnes-Hut tsne
Language:Python1 7 02
10XGenomics/docopt.go
A command-line arguments parser that will make you smile.
Language:Go5 0
10XGenomics/go-sqlite3
sqlite3 driver for go that using database/sql
Language:C
10XGenomics/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
Language:C6 0