Pinned Repositories
Automa.jl
A julia code generator for regular expressions
Bio.jl
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
BioCore.jl
Core types and interfaces for BioJulia packages
BioSequences.jl
Biological sequences for the julia language
BioStructures.jl
A Julia package to read, write and manipulate macromolecular structures
BioSymbols.jl
Nucleic and amino acid primitive types
Contributing
Documentation, guidelines, and policy on contributing to all BioJulia repositories
FASTX.jl
Parse and process FASTA and FASTQ formatted files of biological sequences.
GeneticVariation.jl
Datastructures and algorithms for working with genetic variation
GenomeGraphs.jl
A modern genomics framework for julia
BioJulia's Repositories
BioJulia/BioCore.jl
Core types and interfaces for BioJulia packages
BioJulia/IndexableBitVectors.jl
Fully indexable dictionaries - access/rank/select operations
BioJulia/GenomeBrowsers.jl
BioJulia/Phylogenies.jl
The BioJulia package for working with phylogenetic trees and geneologies.
BioJulia/CWL.jl
Utilities for working with the Common Workflow Language (CWL) from Julia
BioJulia/NaturalSelection.jl
A package containing methods for looking at the effects of natural selection
BioJulia/talks
Slides and materials for talks about BioJulia
BioJulia/Dat.jl
Types and methods for interacting with Dat from the Julia REPL and programs.
BioJulia/BioBridgeR.jl
Compatibility between R classes and BioJulia types for bioinformatics
BioJulia/CountMin.jl
Count-min Sketch implementation for Julia
BioJulia/assets
Logos and other assets
BioJulia/FileIO.jl
Main Package for IO, loading all different kind of files
BioJulia/ragel
Ragel State Machine Compiler - Experimental Julia Support
BioJulia/ragel7
Ragel 7 fork with a few Julia fixes
BioJulia/ReferenceSequences.jl
Data structure for reference sequences
BioJulia/abstracts
Abstracts for conference talks, posters, and papers
BioJulia/attobot
Julia package release bot
BioJulia/BioJulia-stickers
Stickers and logos for BioJulia packages
BioJulia/BSG.jl
A wrapper for the BSG library and suite of tools
BioJulia/Community-Issues
Repo to track BioJulia organisation level issues.
BioJulia/FactCheck.jl
Midje-like testing for Julia
BioJulia/fogsaa
Fast Optimal Global Sequence Alignment Algorithm
BioJulia/juju
A version manager for Julia
BioJulia/mkdocs-biojulia
A BioJulia fork of the mkdocs cinder theme.