Hanjiangna

Pinned Repositories

3d-dna
3D de novo assembly (3D DNA) pipeline
Language:Shell207 13 18655
TGS-GapCloser
A gap-closing software tool that uses long reads to enhance genome assembly.
Language:C++189 7 8314
hifiasm
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Language:C++566 30 69789
salmon
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
Language:C++782 38 839164
EarlGrey
:tea: iOS UI Automation Test Framework
Language:Objective-C5.6k 233 453742
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chromap
Fast alignment and preprocessing of chromatin profiles
Language:C++194 7 11021
HiC-Pro
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
Language:Python391 18 614180
EDTA
Extensive de-novo TE Annotator
Language:Perl354 11 51574
ALLHiC
ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data
Language:Perl175 7 17839