HuaZou

HuaZou's Stars

• geekan/MetaGPT

  🌟 The Multi-Agent Framework: First AI Software Company, Towards Natural Language Programming

  Language:Python46.2k9037215.5k

• squidfunk/mkdocs-material

  Documentation that simply works

  Language:HTML21.5k1402.5k3.6k

• marimo-team/marimo

  A reactive notebook for Python — run reproducible experiments, execute as a script, deploy as an app, and version with git.

  Language:Python8.7k45901319

• qinwf/awesome-R

  A curated list of awesome R packages, frameworks and software.

  Language:R6.1k414261.5k

• christophM/interpretable-ml-book

  Book about interpretable machine learning

  Language:Jupyter Notebook4.8k1392071.1k

• AllenDowney/ThinkStats2

  Text and supporting code for Think Stats, 2nd Edition

  Language:Jupyter Notebook4k2569611.4k

• secdr/research-method

  论文写作与资料分享

  2.6k532580

• zhangxiann/PyTorch_Practice

  这是我学习 PyTorch 的笔记对应的代码，点击查看 PyTorch 笔记在线电子书

  Language:Python1.3k86278

• hbctraining/scRNA-seq_online

  Language:R5391498184

• opencobra/cobrapy

  COBRApy is a package for constraint-based modeling of metabolic networks.

  Language:Python47637675218

• smorabit/hdWGCNA

  High dimensional weighted gene co-expression network analysis

  Language:R371533336

• bioFAM/MOFA2

  Multi-Omics Factor Analysis

  Language:R3111413952

• zakandrewking/escher

  Build, share, and embed visualizations of metabolic pathways.

  Language:JavaScript2131624377

• cdanielmachado/carveme

  CarveMe: genome-scale metabolic model reconstruction

  Language:Python160819155

• Hy4m/linkET

  Everything is Linkable

  Language:R15222941

• EBI-Metagenomics/emg-viral-pipeline

  VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

  Language:Python12877216

• xiangpin/ggstar

  :star: star layer for ggplot2

  Language:R100277

• sjdlabgroup/SAHMI

  Language:R7422515

• victoriapascal/gutsmash

  gutSMASH

  Language:Python5401615

• aomlomics/tourmaline

  Amplicon sequence processing workflow using QIIME 2 and Snakemake

  Language:Python4558119

• leylabmpi/SynTracker

  SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same species) using genome synteny.

  Language:Python25426

• waldronlab/curatedMetagenomicDataAnalyses

  Analyses in R and Python Using curatedMetagenomicData

  Language:Python2510258

• ModelSEED/ModelSEEDpy

  Python package for building and analyzing models using ModelSEED

  Language:Python1911917

• robinschmid/microbe_masst

  Using MASST or fastMASST, adding metadata onto a tree ontology for microbes

  Language:Jupyter Notebook17439

• TheHumphreysLab/Mouse_DKD_Rx_Atlas

  Language:R16005

• PriceLab/Multiomics-BMI

  This repository includes the code used in our multiomics BMI study.

  Language:Jupyter Notebook15600

• ruanzhepu/superCC

  A newly developed metabolic modeling pipeline, SuperCC, which could simulate the performances of different microbiomes.

  Language:MATLAB12012

• computational-metabolomics/structToolbox

  R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox

  Language:R106324

• yuexujiang/IRnet

  Immunotherapy response prediction using pathway knowledge-informed graph neural network

  Language:Jupyter Notebook5201

• Eligo-Bioscience/in-situ-targeted-base-editing-of-gut-bacteria-in-mice

  Language:Jupyter Notebook4100