Illumina/interop

Issues

• Unable to install interop Python module in Docker container.

  #350 opened a month ago by lutrarutra
  2

• imaging_table lacks CLI help docs

  #338 opened 4 months ago by nick-youngblut
  0

• interop-summary: description of columns

  #339 opened 4 months ago by nick-youngblut
  2

• Please update documentation for python bindings

  #340 opened 4 months ago by chaetognatha
  0

• Interop is not compatible with Numpy 2.0.0

  #348 opened 4 months ago by Aratz
  0

• [question]: Understanding interop_index-summary usage and different csv outputs

  #345 opened 4 months ago by tamuanand
  1

• C# Percentage > Q30 by cycle graph

  #344 opened 4 months ago by IIID-Don
  6

• interop-1.3.1-Linux-GNU/bin/summary to give total reads

  #347 opened 5 months ago by Nitin123-4
  0

• interop_index-summary doesn't give any output for NovaseqXplus/Novaseq6000

  #346 opened 5 months ago by Nitin123-4
  0

• Index with # of reads information

  #325 opened a year ago by Nitin123-4
  10

• Metrics Run summary Q30 per read in C#

  #343 opened 6 months ago by IIID-Don
  1

• interop.py_interop_comm.incomplete_file_exception for runs with no indices/demultiplexing

  #341 opened 6 months ago by nicolazilio
  1

• InterOp-summary not returning a properly formatted csv

  #337 opened 7 months ago by nick-youngblut
  3

• Can I get all the index information

  #342 opened 7 months ago by Nitin123-4
  3

• index-summary app only returns header line

  #326 opened 10 months ago by rdavison
  3

• How to calculate cluster density (K/mm2) from the interop module

  #336 opened 10 months ago by kpatankar
  4

• What files/directories are actually needed as input?

  #333 opened a year ago by nick-youngblut
  6

• python tutorials are still Python2

  #332 opened a year ago by nick-youngblut
  4

• Support for python 3.11

  #330 opened a year ago by CodingKaiser
  1

• AlignmentMetricsOut.bin and IndexMetricsOut.bin mapping information

  #329 opened a year ago by NateBaileyTempus
  4

• pip install is version 1.1.23?

  #328 opened a year ago by dmcmanam
  8

• Python wheel for interop?

  #327 opened a year ago by yeemey
  1

• v1.1.27 and higher dumptext is not backwards compatible with error metrics < v6

  #314 opened a year ago by channsoden
  3

• plot_by_lane: density plot

  #324 opened a year ago by kohleman
  2

• Nextseq 500 no values for read.error_rate().mean() and read.percent_aligned().mean()

  #316 opened a year ago by yelekley
  1

• HiSeq - When parsing error metrics, segmentation fault due to illegal access on phi-x adapter array.

  #322 opened a year ago by yechenqiao
  5

• Support for NovaSeqX/NovaSeqXPlus

  #321 opened 2 years ago by tkwitsil
  1

• Bindings for Java

  #320 opened 2 years ago by rich7409
  4

• Documents for Error Version 6 and Extended Tile Version 1 sits in the wrong structure

  #315 opened 2 years ago by zchen1-illumina
  0

• Access to channel names

  #318 opened 2 years ago by sybrohee
  3

• `summary` returns "0" exit code on invalid run

  #312 opened 2 years ago by tetedange13
  0

• Unit of cluster_count_pf?

  #310 opened 2 years ago by yfu-recursion
  4

• interop_summary command issue

  #306 opened 2 years ago by mcnairr2
  3

• Python question: Reading RunParameters.xml

  #309 opened 2 years ago by kohleman
  2

• Error in tutorial_03

  #304 opened 2 years ago by hotsoupisgood
  4

• AttributeError: module 'numpy' has no attribute 'object' in index_summary(run_metrics, level='Barcode')

  #307 opened 2 years ago by hotsoupisgood
  2

• Way to get all indexes from python

  #305 opened 2 years ago by hotsoupisgood
  5

• Legacy Phasing/Prephasing Rate

  #303 opened 2 years ago by PKazakova
  1

• pf std from interop

  #300 opened 2 years ago by katiemharding
  7

• How to install python interop package on M1 mac?

  #282 opened 2 years ago by jwarwick-delfi
  1

• no result was returned

  #295 opened 2 years ago by daisyflemming
  5

• Recent InterOp Python Wheels do not run on Mac OS X High Sierra 10.13

  #293 opened 2 years ago by lukato01
  12

• Python: Per Lane Metrics

  #286 opened 2 years ago by lukato01
  5

• Documentation...?

  #285 opened 2 years ago by oakeley
  1

• InterOp python library incorrectly reporting NovaSeq flowcell surfaces count

  #280 opened 2 years ago by ppswang
  1

• interop.py_interop_metrics.index_out_of_bounds_exception

  #283 opened 2 years ago by lgwatgithub
  6

• summary from interop

  #279 opened 2 years ago by coykMccoyk
  2

• Swath number exceeds number of swaths in RunInfo.xml

  #284 opened 2 years ago by koen-swaerts
  5

• calling `interop_summary` and `interop_index-summary` when using bcl-convert

  #278 opened 3 years ago by BCArg
  3

• Regarding of interop_index-summary result

  #277 opened 3 years ago by hmkim
  15