For segment_pnh relative -out paths lead to results in the wrong path

[FeHoff]

segment_pnh -data inputs/BIDS_raw -out outputs -sub 001 -ses 001 -soft ANTS -params code/params_segment_macaque_ants.json -deriv -pad -nprocs 2

produces the following:

outputs/derivatives/macapype_orig_ants
└── [   3]  sub-001
        └── [   3]  ses-001
            └── [   3]  anat
                └── [   3]  datasink
                    └── [   3]  outputs
                        └── [   3]  derivatives
                            └── [   3]  macapype_orig_ants
                                └── [   3]  sub-001
                                    └── [   3]  ses-001
                                        └── [  10]  anat

full paths get it right:

segment_pnh -data $(pwd)/inputs/BIDS_raw -out $(pwd)/outputs -sub 001 -ses 001 -soft ANTS -params code/params_segment_macaque_ants.json -deriv -pad -nprocs 2

outputs/derivatives/macapype_orig_ants
└── [   3]  sub-001
        └── [   3]  ses-001
              └── [  10]  anat

For portable setup of the computational environment, relative paths are essential.
Great tool, keep up the great work!